HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:41.8 nTPM
HPA Brain:23.4 nTPM
GTEx:41.8 nTPM
FANTOM5:55.6 Scaled Tags Per Million
Pig:57.0 nTPM
Mouse:60.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020071
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.4
Sample id Sample description nTPM
Hippocampus
nTPM: 23.4
2621 Female, age 67, right hemisphere 36.1
2529 Female, age 94, left hemisphere 27.6
1911 Female, age 85, right hemisphere 23.6
2148 Female, age 91, left hemisphere 23.1
1898 Male, age 80, left hemisphere 17.3
1855 Male, age 76, left hemisphere 12.7
Dentate gyrus
nTPM: 18.4
2531 Female, age 67, both hemispheres 27.0
1927 Female, age 91, both hemispheres 23.9
2528 Male, age 74, both hemispheres 18.4
2530 Female, age 94, left hemisphere 17.0
2010 Male, age 76, both hemispheres 13.3
2246 Female, age 85, both hemispheres 10.9
Entorhinal gyrus
nTPM: 17.6
2613 Female, age 94, left hemisphere 28.1
2764 Male, age 80, right hemisphere 20.0
2117 Female, age 91, right hemisphere 16.3
1787 Male, age 76, left hemisphere 14.4
2686 Male, age 75, right hemisphere 13.6
1938 Female, age 85, left hemisphere 13.1
Hippocampus, CA1
nTPM: 17.1
2527 Male, age 74, both hemispheres 25.7
2749 Male, age 80, left hemisphere 24.1
1873 Female, age 85, both hemispheres 14.3
2082 Female, age 91, right hemisphere 12.8
2045 Male, age 76, both hemispheres 8.9
Hippocampus, CA2
nTPM: 18.7
1963 Male, age 80, left hemisphere 26.4
2249 Male, age 74, both hemispheres 24.4
2437 Female, age 94, left hemisphere 19.3
1940 Female, age 85, left hemisphere 16.7
2113 Female, age 91, right hemisphere 14.4
1892 Male, age 76, both hemispheres 10.8
Hippocampus, CA3
nTPM: 20.6
2620 Female, age 94, left hemisphere 30.2
2861 Female, age 67, both hemispheres 27.5
2137 Male, age 80, left hemisphere 23.8
2436 Male, age 74, both hemispheres 15.5
1867 Male, age 76, both hemispheres 14.0
1891 Female, age 85, both hemispheres 12.9
Parahippocampal cortex
nTPM: 17.1
2245 Female, age 91, both hemispheres 30.6
2622 Female, age 67, right hemisphere 27.2
1990 Female, age 91, right hemisphere 19.5
2532 Female, age 72, left hemisphere 16.6
2250 Female, age 67, right hemisphere 16.2
2018 Male, age 76, both hemispheres 14.1
2693 Female, age 94, both hemispheres 12.8
1933 Female, age 85, both hemispheres 11.8
1850 Male, age 80, both hemispheres 11.5
2692 Male, age 74, both hemispheres 11.2
Perirhinal gyrus
nTPM: 14.3
1794 Male, age 80, right hemisphere 18.4
2521 Female, age 94, right hemisphere 16.7
1847 Female, age 91, left hemisphere 15.6
2848 Male, age 76, right hemisphere 10.7
1841 Female, age 85, right hemisphere 9.9
Subiculum
nTPM: 16.1
2619 Male, age 74, both hemispheres 20.9
1977 Female, age 85, both hemispheres 18.7
2729 Female, age 91, right hemisphere 17.4
1901 Male, age 80, both hemispheres 17.0
2042 Male, age 76, both hemispheres 12.7
2438 Female, age 94, left hemisphere 9.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.8
Samples: 197

Max nTPM: 158.8
Min nTPM: 7.2
Std nTPM: 23.7
Median nTPM: 36.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 158.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 127.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 124.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 103.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 98.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 96.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 91.8
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 88.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 85.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 83.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 82.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.6
FF:10153-102I9 76 years, female 66.5
FF:10169-103B7 60 years, female 44.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.0
Pig sample Sample description nTPM
Subiculum
nTPM: 47.0
Samples: 4

Max nTPM: 68.2
Min nTPM: 35.6
Sample A Female 68.2
Sample B Female 40.9
Sample C Male 43.2
Sample D Male 35.6
Dorsal hippocampus
nTPM: 38.6
Samples: 4

Max nTPM: 47.6
Min nTPM: 30.9
Sample A Female 47.6
Sample B Female 41.5
Sample C Male 34.5
Sample D Male 30.9
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 67.4
Min nTPM: 47.7
Sample A Female 62.4
Sample B Female 50.4
Sample C Male 67.4
Sample D Male 47.7
Ventral hippocampus
nTPM: 40.7
Samples: 4

Max nTPM: 52.3
Min nTPM: 30.1
Sample A Female 30.1
Sample B Female 34.3
Sample C Male 52.3
Sample D Male 45.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.1
Samples: 4

Max nTPM: 62.8
Min nTPM: 54.4
Sample A Male 62.8
Sample B Male 60.2
Sample C Female 54.4
Sample D Female 62.8
Hippocampal formation
nTPM: 50.1
Samples: 4

Max nTPM: 52.8
Min nTPM: 46.6
Sample A Male 50.3
Sample B Male 50.5
Sample C Female 52.8
Sample D Female 46.6

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