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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
65.5
nTPM
Monaco:
103.0
nTPM
Schmiedel:
329.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.5
HPA sample
nTPM
gdT-cell nTPM: 57.0
Samples: 6
Max nTPM: 71.8
Min nTPM: 43.3
P10809_1007
53.6
P10809_1022
71.8
P10809_1041
62.2
P10809_1060
43.3
P10809_1077
55.1
P10809_1098
56.2
MAIT T-cell nTPM: 29.3
Samples: 6
Max nTPM: 32.9
Min nTPM: 25.4
P10809_1006
25.4
P10809_1024
29.7
P10809_1043
31.2
P10809_1062
32.9
P10809_1083
27.8
P10809_1097
29.0
Memory CD4 T-cell nTPM: 57.5
Samples: 6
Max nTPM: 65.4
Min nTPM: 51.1
P10809_1014
53.1
P10809_1026
65.4
P10809_1045
62.0
P10809_1064
58.8
P10809_1086
54.7
P10809_1113
51.1
Memory CD8 T-cell nTPM: 47.8
Samples: 5
Max nTPM: 55.8
Min nTPM: 35.7
P10809_1012
44.6
P10809_1027
54.3
P10809_1046
48.5
P10809_1065
55.8
P10809_1111
35.7
Naive CD4 T-cell nTPM: 40.4
Samples: 6
Max nTPM: 46.0
Min nTPM: 35.0
P10809_1015
35.0
P10809_1030
40.6
P10809_1049
43.7
P10809_1068
39.9
P10809_1085
46.0
P10809_1112
37.0
Naive CD8 T-cell nTPM: 35.1
Samples: 6
Max nTPM: 45.2
Min nTPM: 26.0
P10809_1016
26.2
P10809_1031
26.0
P10809_1050
39.1
P10809_1069
43.6
P10809_1087
45.2
P10809_1110
30.7
T-reg nTPM: 65.4
Samples: 6
Max nTPM: 79.8
Min nTPM: 50.8
P10809_1018
65.2
P10809_1037
50.8
P10809_1056
74.1
P10809_1075
60.8
P10809_1094
61.9
P10809_1106
79.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
103.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.4
Samples: 4
Max nTPM: 69.3
Min nTPM: 46.7
RHH5202_R3573
61.3
RHH5230_R3602
46.7
RHH5259_R3631
52.3
RHH5288_R3660
69.3
Effector memory CD8 T-cell nTPM: 80.5
Samples: 4
Max nTPM: 102.4
Min nTPM: 62.6
RHH5203_R3574
75.8
RHH5231_R3603
62.6
RHH5260_R3632
81.2
RHH5289_R3661
102.4
MAIT T-cell nTPM: 42.7
Samples: 4
Max nTPM: 47.4
Min nTPM: 34.2
RHH5233_R3605
34.2
RHH5205_R3576
47.4
RHH5262_R3634
44.5
RHH5297_R3663
44.8
Memory CD4 T-cell TFH nTPM: 78.4
Samples: 4
Max nTPM: 98.1
Min nTPM: 67.9
RHH5300_R3666
73.9
RHH5236_R3608
67.9
RHH5265_R3637
73.8
RHH5208_R3579
98.1
Memory CD4 T-cell Th1 nTPM: 88.2
Samples: 4
Max nTPM: 97.1
Min nTPM: 68.0
RHH5210_R3581
94.1
RHH5302_R3668
97.1
RHH5238_R3610
68.0
RHH5267_R3639
93.5
Memory CD4 T-cell Th1/Th17 nTPM: 96.9
Samples: 4
Max nTPM: 124.4
Min nTPM: 72.9
RHH5303_R3669
101.7
RHH5211_R3582
124.4
RHH5239_R3611
72.9
RHH5268_R3640
88.5
Memory CD4 T-cell Th17 nTPM: 103.0
Samples: 4
Max nTPM: 111.0
Min nTPM: 92.4
RHH5304_R3670
100.3
RHH5212_R3583
111.0
RHH5240_R3612
108.3
RHH5269_R3641
92.4
Memory CD4 T-cell Th2 nTPM: 91.4
Samples: 4
Max nTPM: 107.0
Min nTPM: 79.3
RHH5305_R3671
79.3
RHH5213_R3584
107.0
RHH5241_R3613
85.5
RHH5270_R3642
93.7
Naive CD4 T-cell nTPM: 64.2
Samples: 4
Max nTPM: 70.5
Min nTPM: 56.3
RHH5306_R3672
62.8
RHH5214_R3585
70.5
RHH5242_R3614
56.3
RHH5271_R3643
67.3
Naive CD8 T-cell nTPM: 43.8
Samples: 4
Max nTPM: 48.7
Min nTPM: 40.6
RHH5201_R3572
41.4
RHH5229_R3601
40.6
RHH5258_R3630
44.6
RHH5287_R3659
48.7
Non-Vd2 gdTCR nTPM: 86.8
Samples: 4
Max nTPM: 107.3
Min nTPM: 69.3
RHH5235_R3607
69.3
RHH5264_R3636
81.7
RHH5207_R3578
107.3
RHH5299_R3665
88.8
T-reg nTPM: 81.4
Samples: 4
Max nTPM: 89.4
Min nTPM: 76.7
RHH5301_R3667
89.4
RHH5237_R3609
78.7
RHH5266_R3638
80.6
RHH5209_R3580
76.7
Terminal effector memory CD4 T-cell nTPM: 89.6
Samples: 2
Max nTPM: 90.4
Min nTPM: 88.8
RHH5243_R3615
90.4
RHH5272_R3644
88.8
Terminal effector memory CD8 T-cell nTPM: 89.7
Samples: 4
Max nTPM: 101.5
Min nTPM: 77.2
RHH5232_R3604
77.2
RHH5204_R3575
83.6
RHH5261_R3633
101.5
RHH5296_R3662
96.6
Vd2 gdTCR nTPM: 66.1
Samples: 4
Max nTPM: 87.1
Min nTPM: 53.1
RHH5234_R3606
58.7
RHH5206_R3577
87.1
RHH5263_R3635
65.6
RHH5298_R3664
53.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
