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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
34.8
nTPM
Monaco:
171.9
nTPM
Schmiedel:
202.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.8
HPA sample
nTPM
gdT-cell nTPM: 10.2
Samples: 6
Max nTPM: 18.0
Min nTPM: 5.4
P10809_1007
9.8
P10809_1022
10.2
P10809_1041
5.4
P10809_1060
10.8
P10809_1077
18.0
P10809_1098
6.7
MAIT T-cell nTPM: 19.5
Samples: 6
Max nTPM: 27.7
Min nTPM: 15.3
P10809_1006
26.6
P10809_1024
15.9
P10809_1043
16.0
P10809_1062
15.6
P10809_1083
27.7
P10809_1097
15.3
Memory CD4 T-cell nTPM: 19.5
Samples: 6
Max nTPM: 21.0
Min nTPM: 18.5
P10809_1014
19.0
P10809_1026
19.3
P10809_1045
18.5
P10809_1064
19.2
P10809_1086
19.8
P10809_1113
21.0
Memory CD8 T-cell nTPM: 14.7
Samples: 5
Max nTPM: 19.9
Min nTPM: 8.9
P10809_1012
19.9
P10809_1027
16.6
P10809_1046
12.6
P10809_1065
15.7
P10809_1111
8.9
Naive CD4 T-cell nTPM: 21.3
Samples: 6
Max nTPM: 26.8
Min nTPM: 14.8
P10809_1015
23.3
P10809_1030
14.8
P10809_1049
16.2
P10809_1068
25.4
P10809_1085
21.4
P10809_1112
26.8
Naive CD8 T-cell nTPM: 15.1
Samples: 6
Max nTPM: 18.7
Min nTPM: 12.4
P10809_1016
13.1
P10809_1031
18.7
P10809_1050
12.9
P10809_1069
12.4
P10809_1087
18.0
P10809_1110
15.2
T-reg nTPM: 34.9
Samples: 6
Max nTPM: 43.0
Min nTPM: 22.4
P10809_1018
39.5
P10809_1037
39.5
P10809_1056
38.5
P10809_1075
26.2
P10809_1094
43.0
P10809_1106
22.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
171.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 134.7
Samples: 4
Max nTPM: 195.7
Min nTPM: 86.9
RHH5202_R3573
195.7
RHH5230_R3602
124.2
RHH5259_R3631
132.0
RHH5288_R3660
86.9
Effector memory CD8 T-cell nTPM: 104.3
Samples: 4
Max nTPM: 133.7
Min nTPM: 80.2
RHH5203_R3574
133.7
RHH5231_R3603
80.2
RHH5260_R3632
111.7
RHH5289_R3661
91.6
MAIT T-cell nTPM: 169.6
Samples: 4
Max nTPM: 290.6
Min nTPM: 108.7
RHH5233_R3605
155.4
RHH5205_R3576
290.6
RHH5262_R3634
108.7
RHH5297_R3663
123.6
Memory CD4 T-cell TFH nTPM: 99.4
Samples: 4
Max nTPM: 144.4
Min nTPM: 57.0
RHH5300_R3666
57.0
RHH5236_R3608
106.2
RHH5265_R3637
89.8
RHH5208_R3579
144.4
Memory CD4 T-cell Th1 nTPM: 128.0
Samples: 4
Max nTPM: 151.1
Min nTPM: 115.2
RHH5210_R3581
151.1
RHH5302_R3668
115.2
RHH5238_R3610
128.3
RHH5267_R3639
117.2
Memory CD4 T-cell Th1/Th17 nTPM: 171.9
Samples: 4
Max nTPM: 249.2
Min nTPM: 131.9
RHH5303_R3669
131.9
RHH5211_R3582
249.2
RHH5239_R3611
160.6
RHH5268_R3640
145.8
Memory CD4 T-cell Th17 nTPM: 145.0
Samples: 4
Max nTPM: 198.2
Min nTPM: 120.5
RHH5304_R3670
120.5
RHH5212_R3583
198.2
RHH5240_R3612
123.9
RHH5269_R3641
137.5
Memory CD4 T-cell Th2 nTPM: 83.7
Samples: 4
Max nTPM: 111.2
Min nTPM: 56.9
RHH5305_R3671
62.8
RHH5213_R3584
104.0
RHH5241_R3613
111.2
RHH5270_R3642
56.9
Naive CD4 T-cell nTPM: 102.6
Samples: 4
Max nTPM: 130.1
Min nTPM: 70.1
RHH5306_R3672
70.1
RHH5214_R3585
130.1
RHH5242_R3614
91.8
RHH5271_R3643
118.5
Naive CD8 T-cell nTPM: 96.3
Samples: 4
Max nTPM: 136.4
Min nTPM: 64.4
RHH5201_R3572
136.4
RHH5229_R3601
86.6
RHH5258_R3630
97.8
RHH5287_R3659
64.4
Non-Vd2 gdTCR nTPM: 56.7
Samples: 4
Max nTPM: 79.0
Min nTPM: 39.0
RHH5235_R3607
79.0
RHH5264_R3636
58.0
RHH5207_R3578
50.8
RHH5299_R3665
39.0
T-reg nTPM: 150.0
Samples: 4
Max nTPM: 181.2
Min nTPM: 127.3
RHH5301_R3667
127.3
RHH5237_R3609
140.5
RHH5266_R3638
151.0
RHH5209_R3580
181.2
Terminal effector memory CD4 T-cell nTPM: 70.4
Samples: 2
Max nTPM: 89.5
Min nTPM: 51.2
RHH5243_R3615
51.2
RHH5272_R3644
89.5
Terminal effector memory CD8 T-cell nTPM: 61.9
Samples: 4
Max nTPM: 66.1
Min nTPM: 57.1
RHH5232_R3604
64.3
RHH5204_R3575
57.1
RHH5261_R3633
66.1
RHH5296_R3662
59.9
Vd2 gdTCR nTPM: 128.9
Samples: 4
Max nTPM: 174.3
Min nTPM: 83.2
RHH5234_R3606
174.3
RHH5206_R3577
123.6
RHH5263_R3635
134.4
RHH5298_R3664
83.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
