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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
111.4
nTPM
Monaco:
781.2
nTPM
Schmiedel:
470.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
111.4
HPA sample
nTPM
gdT-cell nTPM: 5.1
Samples: 6
Max nTPM: 13.2
Min nTPM: 1.4
P10809_1007
2.4
P10809_1022
1.4
P10809_1041
13.2
P10809_1060
4.6
P10809_1077
4.1
P10809_1098
4.6
MAIT T-cell nTPM: 24.9
Samples: 6
Max nTPM: 30.3
Min nTPM: 18.3
P10809_1006
29.4
P10809_1024
30.3
P10809_1043
27.1
P10809_1062
21.4
P10809_1083
22.9
P10809_1097
18.3
Memory CD4 T-cell nTPM: 30.4
Samples: 6
Max nTPM: 54.3
Min nTPM: 13.5
P10809_1014
54.3
P10809_1026
27.5
P10809_1045
28.5
P10809_1064
13.5
P10809_1086
21.1
P10809_1113
37.2
Memory CD8 T-cell nTPM: 52.9
Samples: 5
Max nTPM: 102.5
Min nTPM: 11.7
P10809_1012
102.5
P10809_1027
40.2
P10809_1046
33.9
P10809_1065
11.7
P10809_1111
76.4
Naive CD4 T-cell nTPM: 70.6
Samples: 6
Max nTPM: 91.4
Min nTPM: 62.2
P10809_1015
91.4
P10809_1030
68.8
P10809_1049
67.0
P10809_1068
63.9
P10809_1085
62.2
P10809_1112
70.2
Naive CD8 T-cell nTPM: 111.5
Samples: 6
Max nTPM: 199.3
Min nTPM: 9.1
P10809_1016
199.3
P10809_1031
142.9
P10809_1050
114.5
P10809_1069
65.0
P10809_1087
9.1
P10809_1110
137.9
T-reg nTPM: 0.4
Samples: 6
Max nTPM: 2.4
Min nTPM: 0.0
P10809_1018
2.4
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
0.1
P10809_1094
0.0
P10809_1106
0.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
781.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 475.3
Samples: 4
Max nTPM: 648.7
Min nTPM: 328.1
RHH5202_R3573
370.5
RHH5230_R3602
554.0
RHH5259_R3631
648.7
RHH5288_R3660
328.1
Effector memory CD8 T-cell nTPM: 60.8
Samples: 4
Max nTPM: 94.8
Min nTPM: 37.9
RHH5203_R3574
38.5
RHH5231_R3603
94.8
RHH5260_R3632
72.1
RHH5289_R3661
37.9
MAIT T-cell nTPM: 89.2
Samples: 4
Max nTPM: 141.8
Min nTPM: 46.9
RHH5233_R3605
141.8
RHH5205_R3576
46.9
RHH5262_R3634
115.6
RHH5297_R3663
52.6
Memory CD4 T-cell TFH nTPM: 112.1
Samples: 4
Max nTPM: 153.0
Min nTPM: 39.7
RHH5300_R3666
39.7
RHH5236_R3608
153.0
RHH5265_R3637
150.2
RHH5208_R3579
105.6
Memory CD4 T-cell Th1 nTPM: 181.5
Samples: 4
Max nTPM: 272.1
Min nTPM: 67.7
RHH5210_R3581
216.8
RHH5302_R3668
67.7
RHH5238_R3610
272.1
RHH5267_R3639
169.4
Memory CD4 T-cell Th1/Th17 nTPM: 196.0
Samples: 4
Max nTPM: 356.8
Min nTPM: 88.0
RHH5303_R3669
88.0
RHH5211_R3582
100.0
RHH5239_R3611
356.8
RHH5268_R3640
239.1
Memory CD4 T-cell Th17 nTPM: 129.8
Samples: 4
Max nTPM: 248.8
Min nTPM: 52.9
RHH5304_R3670
52.9
RHH5212_R3583
93.3
RHH5240_R3612
248.8
RHH5269_R3641
124.0
Memory CD4 T-cell Th2 nTPM: 114.4
Samples: 4
Max nTPM: 203.7
Min nTPM: 60.7
RHH5305_R3671
60.7
RHH5213_R3584
90.4
RHH5241_R3613
203.7
RHH5270_R3642
102.8
Naive CD4 T-cell nTPM: 323.0
Samples: 4
Max nTPM: 526.2
Min nTPM: 167.7
RHH5306_R3672
167.7
RHH5214_R3585
258.2
RHH5242_R3614
526.2
RHH5271_R3643
339.7
Naive CD8 T-cell nTPM: 781.2
Samples: 4
Max nTPM: 1169.8
Min nTPM: 552.7
RHH5201_R3572
552.7
RHH5229_R3601
1169.8
RHH5258_R3630
658.6
RHH5287_R3659
743.6
Non-Vd2 gdTCR nTPM: 56.8
Samples: 4
Max nTPM: 89.9
Min nTPM: 30.4
RHH5235_R3607
89.9
RHH5264_R3636
73.4
RHH5207_R3578
30.4
RHH5299_R3665
33.5
T-reg nTPM: 37.9
Samples: 4
Max nTPM: 74.8
Min nTPM: 18.1
RHH5301_R3667
18.1
RHH5237_R3609
74.8
RHH5266_R3638
37.3
RHH5209_R3580
21.2
Terminal effector memory CD4 T-cell nTPM: 41.1
Samples: 2
Max nTPM: 60.6
Min nTPM: 21.6
RHH5243_R3615
21.6
RHH5272_R3644
60.6
Terminal effector memory CD8 T-cell nTPM: 34.6
Samples: 4
Max nTPM: 47.3
Min nTPM: 6.6
RHH5232_R3604
44.8
RHH5204_R3575
6.6
RHH5261_R3633
47.3
RHH5296_R3662
39.6
Vd2 gdTCR nTPM: 65.4
Samples: 4
Max nTPM: 122.6
Min nTPM: 13.5
RHH5234_R3606
122.6
RHH5206_R3577
13.5
RHH5263_R3635
74.9
RHH5298_R3664
50.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
