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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
31.7
nTPM
Monaco:
203.7
nTPM
Schmiedel:
373.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
31.7
HPA sample
nTPM
gdT-cell nTPM: 22.2
Samples: 6
Max nTPM: 35.0
Min nTPM: 16.8
P10809_1007
35.0
P10809_1022
20.3
P10809_1041
21.7
P10809_1060
16.8
P10809_1077
18.2
P10809_1098
21.3
MAIT T-cell nTPM: 19.0
Samples: 6
Max nTPM: 24.0
Min nTPM: 13.5
P10809_1006
23.9
P10809_1024
13.5
P10809_1043
17.3
P10809_1062
16.4
P10809_1083
24.0
P10809_1097
19.1
Memory CD4 T-cell nTPM: 28.7
Samples: 6
Max nTPM: 42.8
Min nTPM: 21.0
P10809_1014
42.8
P10809_1026
31.6
P10809_1045
28.4
P10809_1064
21.0
P10809_1086
21.0
P10809_1113
27.6
Memory CD8 T-cell nTPM: 26.2
Samples: 5
Max nTPM: 31.6
Min nTPM: 19.2
P10809_1012
31.6
P10809_1027
31.4
P10809_1046
24.6
P10809_1065
19.2
P10809_1111
24.4
Naive CD4 T-cell nTPM: 29.6
Samples: 6
Max nTPM: 38.1
Min nTPM: 20.1
P10809_1015
34.2
P10809_1030
28.2
P10809_1049
20.1
P10809_1068
29.0
P10809_1085
38.1
P10809_1112
28.1
Naive CD8 T-cell nTPM: 25.8
Samples: 6
Max nTPM: 37.1
Min nTPM: 21.3
P10809_1016
37.1
P10809_1031
25.1
P10809_1050
25.3
P10809_1069
21.3
P10809_1087
21.3
P10809_1110
24.9
T-reg nTPM: 31.7
Samples: 6
Max nTPM: 58.5
Min nTPM: 23.1
P10809_1018
58.5
P10809_1037
28.9
P10809_1056
24.9
P10809_1075
23.1
P10809_1094
28.6
P10809_1106
26.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
203.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 156.6
Samples: 4
Max nTPM: 162.3
Min nTPM: 146.6
RHH5202_R3573
162.2
RHH5230_R3602
146.6
RHH5259_R3631
155.2
RHH5288_R3660
162.3
Effector memory CD8 T-cell nTPM: 165.8
Samples: 4
Max nTPM: 207.0
Min nTPM: 116.7
RHH5203_R3574
167.9
RHH5231_R3603
171.7
RHH5260_R3632
207.0
RHH5289_R3661
116.7
MAIT T-cell nTPM: 117.5
Samples: 4
Max nTPM: 144.1
Min nTPM: 100.0
RHH5233_R3605
114.7
RHH5205_R3576
144.1
RHH5262_R3634
100.0
RHH5297_R3663
111.0
Memory CD4 T-cell TFH nTPM: 185.0
Samples: 4
Max nTPM: 227.9
Min nTPM: 140.0
RHH5300_R3666
175.6
RHH5236_R3608
140.0
RHH5265_R3637
196.4
RHH5208_R3579
227.9
Memory CD4 T-cell Th1 nTPM: 181.3
Samples: 4
Max nTPM: 203.3
Min nTPM: 152.0
RHH5210_R3581
185.0
RHH5302_R3668
152.0
RHH5238_R3610
203.3
RHH5267_R3639
185.0
Memory CD4 T-cell Th1/Th17 nTPM: 176.8
Samples: 4
Max nTPM: 205.1
Min nTPM: 143.0
RHH5303_R3669
143.0
RHH5211_R3582
155.0
RHH5239_R3611
204.0
RHH5268_R3640
205.1
Memory CD4 T-cell Th17 nTPM: 203.7
Samples: 4
Max nTPM: 254.2
Min nTPM: 147.8
RHH5304_R3670
147.8
RHH5212_R3583
216.9
RHH5240_R3612
254.2
RHH5269_R3641
195.9
Memory CD4 T-cell Th2 nTPM: 149.3
Samples: 4
Max nTPM: 184.0
Min nTPM: 122.1
RHH5305_R3671
122.1
RHH5213_R3584
147.3
RHH5241_R3613
143.8
RHH5270_R3642
184.0
Naive CD4 T-cell nTPM: 166.0
Samples: 4
Max nTPM: 194.7
Min nTPM: 133.3
RHH5306_R3672
153.0
RHH5214_R3585
133.3
RHH5242_R3614
194.7
RHH5271_R3643
182.8
Naive CD8 T-cell nTPM: 184.0
Samples: 4
Max nTPM: 211.0
Min nTPM: 171.3
RHH5201_R3572
179.8
RHH5229_R3601
211.0
RHH5258_R3630
171.3
RHH5287_R3659
174.0
Non-Vd2 gdTCR nTPM: 154.0
Samples: 4
Max nTPM: 174.8
Min nTPM: 129.1
RHH5235_R3607
174.8
RHH5264_R3636
172.5
RHH5207_R3578
139.4
RHH5299_R3665
129.1
T-reg nTPM: 139.2
Samples: 4
Max nTPM: 159.0
Min nTPM: 120.7
RHH5301_R3667
151.4
RHH5237_R3609
120.7
RHH5266_R3638
159.0
RHH5209_R3580
125.6
Terminal effector memory CD4 T-cell nTPM: 143.5
Samples: 2
Max nTPM: 148.4
Min nTPM: 138.5
RHH5243_R3615
148.4
RHH5272_R3644
138.5
Terminal effector memory CD8 T-cell nTPM: 151.1
Samples: 4
Max nTPM: 188.2
Min nTPM: 130.1
RHH5232_R3604
149.4
RHH5204_R3575
130.1
RHH5261_R3633
188.2
RHH5296_R3662
136.7
Vd2 gdTCR nTPM: 117.7
Samples: 4
Max nTPM: 124.9
Min nTPM: 110.3
RHH5234_R3606
110.3
RHH5206_R3577
122.7
RHH5263_R3635
124.9
RHH5298_R3664
112.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
