HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:7.3 nTPM
HPA Brain:21.8 nTPM
GTEx:7.3 nTPM
FANTOM5:40.1 Scaled Tags Per Million
Pig:21.2 nTPM
Mouse:12.3 nTPM
Allen mouse:15.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.8
Sample id Sample description nTPM
Hippocampus
nTPM: 21.8
1855 Male, age 76, left hemisphere 24.5
1898 Male, age 80, left hemisphere 23.1
2529 Female, age 94, left hemisphere 23.0
1911 Female, age 85, right hemisphere 22.5
2148 Female, age 91, left hemisphere 19.8
2621 Female, age 67, right hemisphere 17.6
Dentate gyrus
nTPM: 20.7
2530 Female, age 94, left hemisphere 23.8
2528 Male, age 74, both hemispheres 22.1
2010 Male, age 76, both hemispheres 21.8
2246 Female, age 85, both hemispheres 19.3
2531 Female, age 67, both hemispheres 18.7
1927 Female, age 91, both hemispheres 18.2
Entorhinal gyrus
nTPM: 20.7
2117 Female, age 91, right hemisphere 29.5
1938 Female, age 85, left hemisphere 21.3
2686 Male, age 75, right hemisphere 19.6
1787 Male, age 76, left hemisphere 19.0
2764 Male, age 80, right hemisphere 18.6
2613 Female, age 94, left hemisphere 16.3
Hippocampus, CA1
nTPM: 20.2
1873 Female, age 85, both hemispheres 21.8
2045 Male, age 76, both hemispheres 21.6
2082 Female, age 91, right hemisphere 21.2
2527 Male, age 74, both hemispheres 20.6
2749 Male, age 80, left hemisphere 15.8
Hippocampus, CA2
nTPM: 21.4
1963 Male, age 80, left hemisphere 23.6
1940 Female, age 85, left hemisphere 22.4
2249 Male, age 74, both hemispheres 22.3
2113 Female, age 91, right hemisphere 22.1
2437 Female, age 94, left hemisphere 20.0
1892 Male, age 76, both hemispheres 18.0
Hippocampus, CA3
nTPM: 20.2
1891 Female, age 85, both hemispheres 24.2
2436 Male, age 74, both hemispheres 23.8
1867 Male, age 76, both hemispheres 20.4
2861 Female, age 67, both hemispheres 18.7
2620 Female, age 94, left hemisphere 17.6
2137 Male, age 80, left hemisphere 16.6
Parahippocampal cortex
nTPM: 19.2
2018 Male, age 76, both hemispheres 21.7
2250 Female, age 67, right hemisphere 20.9
1933 Female, age 85, both hemispheres 20.1
2692 Male, age 74, both hemispheres 20.0
1990 Female, age 91, right hemisphere 19.7
1850 Male, age 80, both hemispheres 19.3
2532 Female, age 72, left hemisphere 18.7
2245 Female, age 91, both hemispheres 18.2
2693 Female, age 94, both hemispheres 18.2
2622 Female, age 67, right hemisphere 15.1
Perirhinal gyrus
nTPM: 18.1
2521 Female, age 94, right hemisphere 20.6
1841 Female, age 85, right hemisphere 18.7
1794 Male, age 80, right hemisphere 17.6
1847 Female, age 91, left hemisphere 17.1
2848 Male, age 76, right hemisphere 16.2
Subiculum
nTPM: 21.8
2042 Male, age 76, both hemispheres 27.2
2729 Female, age 91, right hemisphere 24.6
1901 Male, age 80, both hemispheres 23.1
1977 Female, age 85, both hemispheres 20.5
2619 Male, age 74, both hemispheres 18.1
2438 Female, age 94, left hemisphere 17.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.3
Samples: 197

Max nTPM: 16.1
Min nTPM: 3.5
Std nTPM: 2.3
Median nTPM: 7.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 15.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 14.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 13.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 12.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 12.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 12.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 11.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 11.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 11.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 11.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.1
FF:10153-102I9 76 years, female 48.0
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.2
Pig sample Sample description nTPM
Subiculum
nTPM: 19.1
Samples: 4

Max nTPM: 20.4
Min nTPM: 18.2
Sample A Female 19.0
Sample B Female 18.2
Sample C Male 18.7
Sample D Male 20.4
Dorsal hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 26.0
Min nTPM: 13.5
Sample A Female 25.8
Sample B Female 19.7
Sample C Male 26.0
Sample D Male 13.5
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 19.4
Min nTPM: 12.1
Sample A Female 15.7
Sample B Female 19.4
Sample C Male 17.4
Sample D Male 12.1
Ventral hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 21.6
Min nTPM: 17.3
Sample A Female 19.3
Sample B Female 17.3
Sample C Male 21.6
Sample D Male 18.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.3
Sample A Male 11.6
Sample B Male 11.7
Sample C Female 11.3
Sample D Female 13.4
Hippocampal formation
nTPM: 12.3
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.5
Sample A Male 11.6
Sample B Male 12.2
Sample C Female 13.9
Sample D Female 11.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.7
583570 Antisense, RP_040831_02_E05, Mouse strain C57BL/6J (56 days, male) 15.7

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