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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
632.1
nTPM
Monaco:
87.2
nTPM
Schmiedel:
88.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
632.1
HPA sample
nTPM
gdT-cell nTPM: 354.5
Samples: 6
Max nTPM: 504.0
Min nTPM: 194.7
P10809_1007
194.7
P10809_1022
263.4
P10809_1041
416.7
P10809_1060
338.9
P10809_1077
409.0
P10809_1098
504.0
MAIT T-cell nTPM: 336.2
Samples: 6
Max nTPM: 567.5
Min nTPM: 150.7
P10809_1006
150.7
P10809_1024
340.9
P10809_1043
319.5
P10809_1062
306.5
P10809_1083
331.9
P10809_1097
567.5
Memory CD4 T-cell nTPM: 479.4
Samples: 6
Max nTPM: 626.6
Min nTPM: 266.3
P10809_1014
266.3
P10809_1026
378.6
P10809_1045
496.1
P10809_1064
609.5
P10809_1086
499.5
P10809_1113
626.6
Memory CD8 T-cell nTPM: 428.4
Samples: 5
Max nTPM: 582.9
Min nTPM: 194.0
P10809_1012
194.0
P10809_1027
399.5
P10809_1046
387.4
P10809_1065
582.9
P10809_1111
578.0
Naive CD4 T-cell nTPM: 632.1
Samples: 6
Max nTPM: 1049.7
Min nTPM: 303.2
P10809_1015
303.2
P10809_1030
519.8
P10809_1049
1049.7
P10809_1068
621.8
P10809_1085
563.1
P10809_1112
735.0
Naive CD8 T-cell nTPM: 454.9
Samples: 6
Max nTPM: 571.8
Min nTPM: 205.8
P10809_1016
205.8
P10809_1031
437.1
P10809_1050
512.2
P10809_1069
571.8
P10809_1087
496.1
P10809_1110
506.5
T-reg nTPM: 570.5
Samples: 6
Max nTPM: 824.8
Min nTPM: 248.4
P10809_1018
248.4
P10809_1037
536.7
P10809_1056
824.8
P10809_1075
606.9
P10809_1094
465.6
P10809_1106
740.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 39.9
Samples: 4
Max nTPM: 63.1
Min nTPM: 27.4
RHH5202_R3573
29.3
RHH5230_R3602
27.4
RHH5259_R3631
63.1
RHH5288_R3660
39.7
Effector memory CD8 T-cell nTPM: 35.2
Samples: 4
Max nTPM: 59.8
Min nTPM: 17.3
RHH5203_R3574
40.4
RHH5231_R3603
23.2
RHH5260_R3632
59.8
RHH5289_R3661
17.3
MAIT T-cell nTPM: 33.7
Samples: 4
Max nTPM: 48.2
Min nTPM: 22.6
RHH5233_R3605
24.1
RHH5205_R3576
48.2
RHH5262_R3634
39.7
RHH5297_R3663
22.6
Memory CD4 T-cell TFH nTPM: 49.5
Samples: 4
Max nTPM: 79.1
Min nTPM: 28.5
RHH5300_R3666
33.8
RHH5236_R3608
79.1
RHH5265_R3637
28.5
RHH5208_R3579
56.5
Memory CD4 T-cell Th1 nTPM: 67.0
Samples: 4
Max nTPM: 95.8
Min nTPM: 34.9
RHH5210_R3581
34.9
RHH5302_R3668
73.5
RHH5238_R3610
95.8
RHH5267_R3639
63.6
Memory CD4 T-cell Th1/Th17 nTPM: 47.3
Samples: 4
Max nTPM: 55.7
Min nTPM: 39.0
RHH5303_R3669
40.3
RHH5211_R3582
39.0
RHH5239_R3611
54.0
RHH5268_R3640
55.7
Memory CD4 T-cell Th17 nTPM: 43.8
Samples: 4
Max nTPM: 46.8
Min nTPM: 42.3
RHH5304_R3670
43.7
RHH5212_R3583
42.3
RHH5240_R3612
46.8
RHH5269_R3641
42.5
Memory CD4 T-cell Th2 nTPM: 61.7
Samples: 4
Max nTPM: 96.9
Min nTPM: 42.2
RHH5305_R3671
96.9
RHH5213_R3584
45.2
RHH5241_R3613
42.2
RHH5270_R3642
62.6
Naive CD4 T-cell nTPM: 87.2
Samples: 4
Max nTPM: 143.6
Min nTPM: 36.9
RHH5306_R3672
89.2
RHH5214_R3585
143.6
RHH5242_R3614
36.9
RHH5271_R3643
79.1
Naive CD8 T-cell nTPM: 40.6
Samples: 4
Max nTPM: 57.0
Min nTPM: 17.3
RHH5201_R3572
33.9
RHH5229_R3601
54.0
RHH5258_R3630
17.3
RHH5287_R3659
57.0
Non-Vd2 gdTCR nTPM: 48.3
Samples: 4
Max nTPM: 54.0
Min nTPM: 40.6
RHH5235_R3607
47.7
RHH5264_R3636
54.0
RHH5207_R3578
50.7
RHH5299_R3665
40.6
T-reg nTPM: 60.1
Samples: 4
Max nTPM: 67.4
Min nTPM: 55.0
RHH5301_R3667
67.4
RHH5237_R3609
55.0
RHH5266_R3638
62.5
RHH5209_R3580
55.4
Terminal effector memory CD4 T-cell nTPM: 33.1
Samples: 2
Max nTPM: 36.2
Min nTPM: 29.9
RHH5243_R3615
36.2
RHH5272_R3644
29.9
Terminal effector memory CD8 T-cell nTPM: 64.5
Samples: 4
Max nTPM: 113.1
Min nTPM: 20.2
RHH5232_R3604
20.2
RHH5204_R3575
113.1
RHH5261_R3633
65.5
RHH5296_R3662
59.2
Vd2 gdTCR nTPM: 61.5
Samples: 4
Max nTPM: 112.4
Min nTPM: 26.7
RHH5234_R3606
26.7
RHH5206_R3577
112.4
RHH5263_R3635
60.8
RHH5298_R3664
45.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
