HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:52.7 nTPM
HPA Brain:15.7 nTPM
GTEx:52.7 nTPM
FANTOM5:69.7 Scaled Tags Per Million
Pig:30.4 nTPM
Mouse:132.4 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014650
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.8
1898 Male, age 80, left hemisphere 17.9
1855 Male, age 76, left hemisphere 16.7
2621 Female, age 67, right hemisphere 14.5
2148 Female, age 91, left hemisphere 14.1
1911 Female, age 85, right hemisphere 13.1
2529 Female, age 94, left hemisphere 12.5
Dentate gyrus
nTPM: 14.6
2010 Male, age 76, both hemispheres 17.4
2530 Female, age 94, left hemisphere 15.6
2246 Female, age 85, both hemispheres 14.0
1927 Female, age 91, both hemispheres 13.8
2531 Female, age 67, both hemispheres 13.4
2528 Male, age 74, both hemispheres 13.1
Entorhinal gyrus
nTPM: 13.7
2117 Female, age 91, right hemisphere 14.9
2764 Male, age 80, right hemisphere 14.6
1787 Male, age 76, left hemisphere 14.3
1938 Female, age 85, left hemisphere 13.8
2686 Male, age 75, right hemisphere 12.7
2613 Female, age 94, left hemisphere 11.9
Hippocampus, CA1
nTPM: 15.4
2749 Male, age 80, left hemisphere 19.0
2045 Male, age 76, both hemispheres 16.9
1873 Female, age 85, both hemispheres 14.8
2082 Female, age 91, right hemisphere 13.6
2527 Male, age 74, both hemispheres 12.8
Hippocampus, CA2
nTPM: 14.6
1892 Male, age 76, both hemispheres 18.3
1963 Male, age 80, left hemisphere 15.8
1940 Female, age 85, left hemisphere 14.2
2113 Female, age 91, right hemisphere 13.5
2249 Male, age 74, both hemispheres 12.9
2437 Female, age 94, left hemisphere 12.8
Hippocampus, CA3
nTPM: 15.7
1867 Male, age 76, both hemispheres 18.0
2436 Male, age 74, both hemispheres 17.7
2620 Female, age 94, left hemisphere 15.6
2861 Female, age 67, both hemispheres 15.5
2137 Male, age 80, left hemisphere 14.1
1891 Female, age 85, both hemispheres 13.6
Parahippocampal cortex
nTPM: 12.7
2018 Male, age 76, both hemispheres 15.2
1933 Female, age 85, both hemispheres 13.8
2250 Female, age 67, right hemisphere 13.5
2245 Female, age 91, both hemispheres 13.3
1850 Male, age 80, both hemispheres 12.5
2692 Male, age 74, both hemispheres 12.5
1990 Female, age 91, right hemisphere 12.4
2532 Female, age 72, left hemisphere 12.2
2622 Female, age 67, right hemisphere 11.3
2693 Female, age 94, both hemispheres 10.0
Perirhinal gyrus
nTPM: 13.1
1847 Female, age 91, left hemisphere 14.8
1794 Male, age 80, right hemisphere 13.5
1841 Female, age 85, right hemisphere 13.1
2848 Male, age 76, right hemisphere 12.1
2521 Female, age 94, right hemisphere 11.9
Subiculum
nTPM: 12.9
2042 Male, age 76, both hemispheres 14.6
1901 Male, age 80, both hemispheres 14.3
1977 Female, age 85, both hemispheres 14.0
2729 Female, age 91, right hemisphere 11.9
2619 Male, age 74, both hemispheres 11.8
2438 Female, age 94, left hemisphere 11.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.7
Samples: 197

Max nTPM: 96.9
Min nTPM: 30.4
Std nTPM: 10.2
Median nTPM: 52.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 96.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 87.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 86.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 81.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 78.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 74.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 74.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 73.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 72.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 72.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 72.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.7
FF:10169-103B7 60 years, female 81.0
FF:10153-102I9 76 years, female 58.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.4
Pig sample Sample description nTPM
Subiculum
nTPM: 25.8
Samples: 4

Max nTPM: 33.1
Min nTPM: 22.3
Sample A Female 33.1
Sample B Female 25.3
Sample C Male 22.4
Sample D Male 22.3
Dorsal hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 39.9
Min nTPM: 22.4
Sample A Female 39.9
Sample B Female 30.6
Sample C Male 28.8
Sample D Male 22.4
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 29.8
Min nTPM: 18.3
Sample A Female 24.8
Sample B Female 29.8
Sample C Male 27.7
Sample D Male 18.3
Ventral hippocampus
nTPM: 27.9
Samples: 4

Max nTPM: 32.7
Min nTPM: 22.5
Sample A Female 28.1
Sample B Female 22.5
Sample C Male 32.7
Sample D Male 28.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 132.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 117.7
Samples: 4

Max nTPM: 119.9
Min nTPM: 112.7
Sample A Male 112.7
Sample B Male 118.4
Sample C Female 119.7
Sample D Female 119.9
Hippocampal formation
nTPM: 132.4
Samples: 4

Max nTPM: 149.5
Min nTPM: 121.3
Sample A Male 121.3
Sample B Male 125.4
Sample C Female 149.5
Sample D Female 133.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
513478 Antisense, RP_040810_01_G08, Mouse strain C57BL/6J (56 days, male) 9.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org