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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
85.6
nTPM
Monaco:
125.8
nTPM
Schmiedel:
154.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.6
HPA sample
nTPM
gdT-cell nTPM: 85.6
Samples: 6
Max nTPM: 115.1
Min nTPM: 71.6
P10809_1007
79.7
P10809_1022
85.4
P10809_1041
115.1
P10809_1060
71.6
P10809_1077
84.0
P10809_1098
78.0
MAIT T-cell nTPM: 85.4
Samples: 6
Max nTPM: 100.1
Min nTPM: 70.9
P10809_1006
72.0
P10809_1024
77.1
P10809_1043
100.1
P10809_1062
96.4
P10809_1083
96.1
P10809_1097
70.9
Memory CD4 T-cell nTPM: 68.5
Samples: 6
Max nTPM: 90.9
Min nTPM: 53.0
P10809_1014
55.9
P10809_1026
90.9
P10809_1045
73.3
P10809_1064
70.0
P10809_1086
67.8
P10809_1113
53.0
Memory CD8 T-cell nTPM: 66.9
Samples: 5
Max nTPM: 107.1
Min nTPM: 49.4
P10809_1012
54.7
P10809_1027
58.6
P10809_1046
107.1
P10809_1065
64.9
P10809_1111
49.4
Naive CD4 T-cell nTPM: 58.2
Samples: 6
Max nTPM: 77.8
Min nTPM: 39.4
P10809_1015
39.4
P10809_1030
71.5
P10809_1049
77.8
P10809_1068
50.1
P10809_1085
66.0
P10809_1112
44.2
Naive CD8 T-cell nTPM: 53.9
Samples: 6
Max nTPM: 71.5
Min nTPM: 42.0
P10809_1016
47.3
P10809_1031
45.2
P10809_1050
51.7
P10809_1069
65.7
P10809_1087
71.5
P10809_1110
42.0
T-reg nTPM: 75.0
Samples: 6
Max nTPM: 119.5
Min nTPM: 50.2
P10809_1018
63.1
P10809_1037
73.7
P10809_1056
119.5
P10809_1075
71.7
P10809_1094
71.6
P10809_1106
50.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
125.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 76.6
Samples: 4
Max nTPM: 88.3
Min nTPM: 56.9
RHH5202_R3573
85.0
RHH5230_R3602
76.3
RHH5259_R3631
56.9
RHH5288_R3660
88.3
Effector memory CD8 T-cell nTPM: 115.9
Samples: 4
Max nTPM: 143.7
Min nTPM: 77.6
RHH5203_R3574
119.8
RHH5231_R3603
122.6
RHH5260_R3632
77.6
RHH5289_R3661
143.7
MAIT T-cell nTPM: 123.2
Samples: 4
Max nTPM: 154.7
Min nTPM: 96.5
RHH5233_R3605
154.7
RHH5205_R3576
96.5
RHH5262_R3634
125.0
RHH5297_R3663
116.7
Memory CD4 T-cell TFH nTPM: 90.1
Samples: 4
Max nTPM: 110.9
Min nTPM: 73.7
RHH5300_R3666
73.7
RHH5236_R3608
110.9
RHH5265_R3637
86.9
RHH5208_R3579
88.7
Memory CD4 T-cell Th1 nTPM: 71.4
Samples: 4
Max nTPM: 85.0
Min nTPM: 59.3
RHH5210_R3581
74.3
RHH5302_R3668
85.0
RHH5238_R3610
59.3
RHH5267_R3639
66.8
Memory CD4 T-cell Th1/Th17 nTPM: 93.3
Samples: 4
Max nTPM: 136.8
Min nTPM: 50.7
RHH5303_R3669
136.8
RHH5211_R3582
99.5
RHH5239_R3611
50.7
RHH5268_R3640
86.0
Memory CD4 T-cell Th17 nTPM: 81.9
Samples: 4
Max nTPM: 92.1
Min nTPM: 68.4
RHH5304_R3670
92.1
RHH5212_R3583
85.1
RHH5240_R3612
82.1
RHH5269_R3641
68.4
Memory CD4 T-cell Th2 nTPM: 103.1
Samples: 4
Max nTPM: 114.7
Min nTPM: 90.4
RHH5305_R3671
90.4
RHH5213_R3584
108.5
RHH5241_R3613
114.7
RHH5270_R3642
98.7
Naive CD4 T-cell nTPM: 63.2
Samples: 4
Max nTPM: 67.3
Min nTPM: 59.7
RHH5306_R3672
62.0
RHH5214_R3585
67.3
RHH5242_R3614
59.7
RHH5271_R3643
63.8
Naive CD8 T-cell nTPM: 56.9
Samples: 4
Max nTPM: 73.4
Min nTPM: 22.9
RHH5201_R3572
71.1
RHH5229_R3601
22.9
RHH5258_R3630
73.4
RHH5287_R3659
60.3
Non-Vd2 gdTCR nTPM: 124.7
Samples: 4
Max nTPM: 138.1
Min nTPM: 110.8
RHH5235_R3607
110.8
RHH5264_R3636
124.8
RHH5207_R3578
138.1
RHH5299_R3665
125.1
T-reg nTPM: 86.3
Samples: 4
Max nTPM: 118.2
Min nTPM: 68.2
RHH5301_R3667
88.3
RHH5237_R3609
118.2
RHH5266_R3638
70.4
RHH5209_R3580
68.2
Terminal effector memory CD4 T-cell nTPM: 111.5
Samples: 2
Max nTPM: 117.4
Min nTPM: 105.6
RHH5243_R3615
105.6
RHH5272_R3644
117.4
Terminal effector memory CD8 T-cell nTPM: 125.8
Samples: 4
Max nTPM: 159.0
Min nTPM: 80.6
RHH5232_R3604
159.0
RHH5204_R3575
127.5
RHH5261_R3633
80.6
RHH5296_R3662
136.0
Vd2 gdTCR nTPM: 101.9
Samples: 4
Max nTPM: 119.1
Min nTPM: 78.2
RHH5234_R3606
112.9
RHH5206_R3577
119.1
RHH5263_R3635
78.2
RHH5298_R3664
97.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
