HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:16.5 nTPM
HPA Brain:75.3 nTPM
GTEx:16.5 nTPM
FANTOM5:50.9 Scaled Tags Per Million
Mouse:12.9 nTPM
Allen mouse:15.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019232Antibody HPA021497Antibody HPA021768
Glial cells MediumNot detectedMedium
Neuronal cells HighMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.3
Sample id Sample description nTPM
Hippocampus
nTPM: 69.9
2621 Female, age 67, right hemisphere 81.9
2529 Female, age 94, left hemisphere 80.1
2148 Female, age 91, left hemisphere 77.2
1911 Female, age 85, right hemisphere 71.0
1855 Male, age 76, left hemisphere 61.7
1898 Male, age 80, left hemisphere 47.4
Dentate gyrus
nTPM: 69.6
2531 Female, age 67, both hemispheres 90.2
2530 Female, age 94, left hemisphere 76.0
2246 Female, age 85, both hemispheres 74.1
2010 Male, age 76, both hemispheres 61.0
2528 Male, age 74, both hemispheres 58.6
1927 Female, age 91, both hemispheres 58.0
Entorhinal gyrus
nTPM: 70.5
2686 Male, age 75, right hemisphere 94.2
2613 Female, age 94, left hemisphere 74.5
2117 Female, age 91, right hemisphere 67.2
2764 Male, age 80, right hemisphere 66.6
1787 Male, age 76, left hemisphere 63.6
1938 Female, age 85, left hemisphere 56.7
Hippocampus, CA1
nTPM: 62.2
2527 Male, age 74, both hemispheres 65.9
1873 Female, age 85, both hemispheres 64.8
2082 Female, age 91, right hemisphere 64.4
2045 Male, age 76, both hemispheres 64.0
2749 Male, age 80, left hemisphere 52.0
Hippocampus, CA2
nTPM: 60.8
1940 Female, age 85, left hemisphere 69.8
2437 Female, age 94, left hemisphere 68.0
2113 Female, age 91, right hemisphere 65.5
1963 Male, age 80, left hemisphere 55.9
1892 Male, age 76, both hemispheres 52.9
2249 Male, age 74, both hemispheres 52.6
Hippocampus, CA3
nTPM: 69.5
2861 Female, age 67, both hemispheres 91.2
2620 Female, age 94, left hemisphere 89.0
1891 Female, age 85, both hemispheres 69.1
2436 Male, age 74, both hemispheres 57.5
1867 Male, age 76, both hemispheres 55.1
2137 Male, age 80, left hemisphere 54.8
Parahippocampal cortex
nTPM: 72.6
2622 Female, age 67, right hemisphere 101.7
2532 Female, age 72, left hemisphere 86.3
2692 Male, age 74, both hemispheres 79.6
2245 Female, age 91, both hemispheres 73.7
2693 Female, age 94, both hemispheres 68.4
2018 Male, age 76, both hemispheres 67.6
1990 Female, age 91, right hemisphere 65.7
2250 Female, age 67, right hemisphere 61.6
1933 Female, age 85, both hemispheres 60.8
1850 Male, age 80, both hemispheres 60.6
Perirhinal gyrus
nTPM: 60.2
2848 Male, age 76, right hemisphere 68.7
1794 Male, age 80, right hemisphere 60.5
1841 Female, age 85, right hemisphere 60.5
2521 Female, age 94, right hemisphere 59.3
1847 Female, age 91, left hemisphere 52.2
Subiculum
nTPM: 75.3
2438 Female, age 94, left hemisphere 94.2
2042 Male, age 76, both hemispheres 78.3
2619 Male, age 74, both hemispheres 75.5
1977 Female, age 85, both hemispheres 70.0
1901 Male, age 80, both hemispheres 67.3
2729 Female, age 91, right hemisphere 66.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.5
Samples: 197

Max nTPM: 38.7
Min nTPM: 4.8
Std nTPM: 4.6
Median nTPM: 15.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 38.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 34.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 32.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 30.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 29.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 28.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 27.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 26.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 26.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 26.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 24.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.9
FF:10153-102I9 76 years, female 61.4
FF:10169-103B7 60 years, female 40.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 13.8
Min nTPM: 11.7
Sample A Male 12.6
Sample B Male 13.5
Sample C Female 11.7
Sample D Female 13.8
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 12.9
Min nTPM: 10.5
Sample A Male 11.6
Sample B Male 12.9
Sample C Female 10.5
Sample D Female 12.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.4
69444915 Antisense, RP_050414_04_H06, Mouse strain C57BL/6J (56 days, male) 15.4

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