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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
37.1
nTPM
HPA:
37.1
nTPM
GTEx:
13.8
nTPM
FANTOM5:
142.5
Scaled Tags Per Million
SMALL INTESTINE - Annotated protein expression
Pending normal tissue analysis
SMALL INTESTINE - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPM
37.1
Male, age 65
Small intestine sample 232 nTPM: 57.5
Cell types%
Glandular cells:
55
Smooth muscle cells:
5
Other cell types:
40
Male, age 39
Small intestine sample 233 nTPM: 34.4
Cell types%
Glandular cells:
40
Smooth muscle cells:
5
Other cell types:
55
Male, age 68
Small intestine sample 234 nTPM: 2.6
Cell types%
Glandular cells:
30
Smooth muscle cells:
15
Other cell types:
55
Male, age 85
Small intestine sample 235 nTPM: 53.7
SMALL INTESTINE - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
13.8
GTEx sample id
Sample description
nTPM
Small Intestine - Terminal Ileum Average nTPM: 13.8
Samples: 187
Max nTPM: 46.4
Min nTPM: 2.2
Std nTPM: 8.2
Median nTPM: 11.9
GTEX-1GMR2-1026-SM-7MKHJ
50-59 years, male
46.4
GTEX-111YS-1426-SM-5GID8
60-69 years, male
44.4
GTEX-1CAMR-0826-SM-7MKFK
20-29 years, male
39.9
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
38.5
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
37.1
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
33.1
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
31.6
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
31.2
GTEX-ZTSS-0926-SM-59865
40-49 years, male
30.8
GTEX-1J8Q3-2526-SM-CNNQ4
60-69 years, male
29.7
GTEX-1MGNQ-2326-SM-EV7BG
40-49 years, male
29.0
GTEX-14PJ6-1726-SM-6AJBN
60-69 years, female
28.7
GTEX-1B8KE-1726-SM-7IGMN
50-59 years, male
27.8
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
27.5
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
27.0
GTEX-ZDTT-1726-SM-5HL69
60-69 years, male
26.0
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
25.8
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
25.6
GTEX-1QP2A-2426-SM-EXOJA
50-59 years, male
25.5
GTEX-13O61-1326-SM-5KM31
60-69 years, male
25.2
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
25.2
GTEX-YFCO-1326-SM-664NV
40-49 years, male
25.2
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
23.8
GTEX-1122O-1326-SM-5H11F
60-69 years, female
23.2
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
22.7
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
22.2
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
22.1
GTEX-13X6H-1826-SM-7EWCZ
50-59 years, female
21.5
GTEX-ZLWG-1626-SM-DNZZ1
50-59 years, female
21.4
GTEX-14PN3-2026-SM-68729
60-69 years, female
21.3
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
21.2
GTEX-Y5V5-1826-SM-4VDS5
60-69 years, female
20.9
GTEX-14PKU-1626-SM-6871C
40-49 years, female
20.8
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
20.7
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
20.5
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
20.5
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
20.3
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
19.8
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
19.4
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
19.4
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
19.3
GTEX-16MTA-1526-SM-6LPJB
50-59 years, male
18.8
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
18.7
GTEX-14PJN-0826-SM-686ZL
30-39 years, male
17.8
GTEX-144GM-1026-SM-79OKU
20-29 years, male
17.6
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
17.4
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
17.3
GTEX-18A66-2526-SM-7KFTZ
60-69 years, male
17.2
GTEX-1JN76-1126-SM-C1YRL
20-29 years, female
17.1
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
17.0
GTEX-1192X-2526-SM-59868
50-59 years, male
16.7
GTEX-ZG7Y-1926-SM-DNZZ5
50-59 years, male
16.7
GTEX-14PKV-2026-SM-6AJ9A
20-29 years, female
16.2
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
16.1
GTEX-15G1A-1726-SM-6LPI4
30-39 years, male
15.8
GTEX-16AAH-1426-SM-7KFTR
50-59 years, male
15.8
GTEX-1JK1U-1226-SM-CNNPN
60-69 years, male
15.8
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
15.6
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
15.4
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
15.4
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
15.3
GTEX-1S5ZA-1326-SM-EV7BB
20-29 years, male
15.2
GTEX-1AMFI-1926-SM-731F2
50-59 years, female
15.1
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
15.1
GTEX-1CB4F-1826-SM-7MGXI
60-69 years, male
14.9
GTEX-1K9T9-2726-SM-D4P3E
50-59 years, female
14.9
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
14.7
GTEX-1L5NE-1826-SM-EV79T
50-59 years, male
14.7
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
14.6
GTEX-1QPFJ-2626-SM-DPRZU
30-39 years, female
14.6
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
14.4
GTEX-11TUW-1926-SM-5BC58
60-69 years, male
14.2
GTEX-13113-1226-SM-5EGHT
60-69 years, female
14.2
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
14.0
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
13.8
GTEX-1F75I-2526-SM-9WPOZ
40-49 years, male
13.7
GTEX-1LGOU-1426-SM-D3L8N
20-29 years, female
13.7
GTEX-1CAMS-2426-SM-7DHMV
40-49 years, female
13.6
GTEX-1GL5R-2026-SM-7MKHP
50-59 years, male
13.6
GTEX-13W3W-2026-SM-5K7UL
60-69 years, female
13.5
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
13.5
GTEX-1PDJ9-1826-SM-E9U66
20-29 years, male
13.5
GTEX-1J8QM-1026-SM-C1YQA
60-69 years, female
13.3
GTEX-183FY-1626-SM-793D8
20-29 years, male
13.0
GTEX-14XAO-1926-SM-6ETZO
60-69 years, female
12.8
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
12.7
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
12.6
GTEX-131XE-0926-SM-5HL7J
50-59 years, male
12.3
GTEX-1GMR3-2726-SM-7MKFB
40-49 years, male
12.3
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
12.2
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
12.2
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
12.1
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
12.0
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
11.9
GTEX-1KXAM-2026-SM-DHXKI
60-69 years, male
11.9
GTEX-XPVG-1726-SM-4B65W
50-59 years, male
11.7
GTEX-1EMGI-2826-SM-7IGMR
60-69 years, male
11.4
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
11.4
GTEX-15DZA-0826-SM-6AJBF
30-39 years, female
11.2
GTEX-1R9PM-1626-SM-DPRY9
20-29 years, male
11.2
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
11.1
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
11.1
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
10.9
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
10.8
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
10.7
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
10.6
GTEX-1R7EU-1326-SM-E6CQ6
60-69 years, male
10.6
GTEX-14PK6-1626-SM-6871I
70-79 years, female
10.5
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
10.5
GTEX-1PIEJ-1526-SM-E6CP8
20-29 years, female
10.5
GTEX-1LBAC-1526-SM-CXZKU
20-29 years, male
10.3
GTEX-1R9K4-2326-SM-E6CRB
60-69 years, male
10.3
GTEX-13111-1426-SM-5DUW3
50-59 years, male
10.2
GTEX-1HSMQ-2226-SM-C1YRD
50-59 years, male
10.2
GTEX-ZF29-1626-SM-4WKFJ
60-69 years, female
10.0
GTEX-1JJE9-2226-SM-CXZJM
70-79 years, male
9.9
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
9.5
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
9.5
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
9.5
GTEX-14PJ3-1326-SM-664O7
50-59 years, male
9.3
GTEX-1R7EV-1226-SM-DTX82
40-49 years, male
9.3
GTEX-18QFQ-1626-SM-72D7H
30-39 years, male
9.1
GTEX-WYJK-1526-SM-4ONCW
50-59 years, male
9.1
GTEX-1QW4Y-1226-SM-EWRMY
30-39 years, male
9.1
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
9.0
GTEX-16NGA-1126-SM-7KFSY
40-49 years, female
8.9
GTEX-17MFQ-1026-SM-7KFSZ
20-29 years, male
8.9
GTEX-1RAZQ-2226-SM-DPRZR
30-39 years, male
8.8
GTEX-1RAZR-1826-SM-E6CRE
40-49 years, male
8.8
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
8.7
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
8.7
GTEX-1IKOE-1926-SM-ARU7V
30-39 years, female
8.7
GTEX-1R9JW-1926-SM-EVR4J
30-39 years, female
8.7
GTEX-1C475-1426-SM-793CH
40-49 years, female
8.6
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
8.6
GTEX-1JMQK-2426-SM-CXZJU
60-69 years, male
8.5
GTEX-WY7C-1826-SM-4ONCE
50-59 years, male
8.4
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
8.4
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
8.4
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
8.3
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
8.3
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
8.1
GTEX-13NYB-1826-SM-5J1N3
40-49 years, male
8.0
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
8.0
GTEX-11LCK-1926-SM-5A5KE
30-39 years, male
7.9
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
7.9
GTEX-1H11D-2526-SM-9JGGU
40-49 years, male
7.8
GTEX-1OKEX-1126-SM-DTXEB
60-69 years, male
7.8
GTEX-1497J-1926-SM-5TDCC
60-69 years, male
7.7
GTEX-1LH75-1926-SM-DIPGD
50-59 years, female
7.3
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
7.1
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
7.1
GTEX-1I1GT-1826-SM-ARZLW
60-69 years, female
7.1
GTEX-Y3I4-1326-SM-4TT8Z
50-59 years, male
6.9
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
6.7
GTEX-17HHE-1726-SM-79OKT
50-59 years, male
6.7
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
6.3
GTEX-1OJC3-1626-SM-E9U65
20-29 years, male
6.3
GTEX-1QP28-1726-SM-E6CRK
50-59 years, female
6.3
GTEX-1R9K5-2026-SM-E6CPS
50-59 years, male
6.3
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
6.1
GTEX-14C39-1826-SM-5ZZW4
40-49 years, male
6.0
GTEX-1AX8Z-2526-SM-731E3
60-69 years, male
5.8
GTEX-16A39-1426-SM-6LLI6
30-39 years, female
5.5
GTEX-117YX-0326-SM-5GICL
50-59 years, male
5.3
GTEX-1BAJH-2526-SM-7IGOT
70-79 years, male
5.2
GTEX-1B8KZ-1126-SM-7IGLX
50-59 years, male
5.1
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
4.9
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
4.8
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
4.6
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
4.6
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
4.6
GTEX-1QCLZ-2126-SM-EWRNC
60-69 years, female
4.5
GTEX-1C64O-2526-SM-79ONO
60-69 years, male
4.4
GTEX-1RAZA-1826-SM-DTXA2
20-29 years, male
4.4
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
4.3
GTEX-1S82Z-1826-SM-E9TIK
30-39 years, female
4.2
GTEX-WHSB-1026-SM-4M1XN
50-59 years, male
4.1
GTEX-Y111-2226-SM-4SOJB
50-59 years, male
3.8
GTEX-1H1DE-1426-SM-9JGHV
20-29 years, male
3.7
GTEX-1MUQO-2426-SM-EAZ5A
60-69 years, male
3.7
GTEX-17KNJ-1626-SM-718AL
50-59 years, male
3.5
GTEX-1NSGN-2126-SM-DPRYN
50-59 years, male
3.0
GTEX-15EU6-1826-SM-7PC1W
50-59 years, male
2.9
GTEX-14BMU-1426-SM-5TDE5
20-29 years, female
2.6
GTEX-WFON-1526-SM-4LVMP
40-49 years, male
2.3
GTEX-ZAB5-1526-SM-5HL9P
50-59 years, male
2.2
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SMALL INTESTINE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
The Human Protein Atlas project is funded
