HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:54.9 nTPM
HPA Brain:22.4 nTPM
GTEx:54.9 nTPM
FANTOM5:19.3 Scaled Tags Per Million
Pig:12.5 nTPM
Mouse:8.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.4
Sample id Sample description nTPM
Hippocampus
nTPM: 20.0
1898 Male, age 80, left hemisphere 30.4
2529 Female, age 94, left hemisphere 22.0
2148 Female, age 91, left hemisphere 19.6
1911 Female, age 85, right hemisphere 17.8
2621 Female, age 67, right hemisphere 15.0
1855 Male, age 76, left hemisphere 14.8
Dentate gyrus
nTPM: 19.9
2530 Female, age 94, left hemisphere 25.9
2010 Male, age 76, both hemispheres 23.3
2528 Male, age 74, both hemispheres 22.0
1927 Female, age 91, both hemispheres 18.3
2246 Female, age 85, both hemispheres 15.3
2531 Female, age 67, both hemispheres 14.5
Entorhinal gyrus
nTPM: 19.6
2764 Male, age 80, right hemisphere 25.6
2117 Female, age 91, right hemisphere 23.8
1787 Male, age 76, left hemisphere 20.6
1938 Female, age 85, left hemisphere 18.9
2613 Female, age 94, left hemisphere 15.1
2686 Male, age 75, right hemisphere 13.5
Hippocampus, CA1
nTPM: 22.4
2749 Male, age 80, left hemisphere 33.6
2082 Female, age 91, right hemisphere 23.2
1873 Female, age 85, both hemispheres 19.1
2527 Male, age 74, both hemispheres 18.9
2045 Male, age 76, both hemispheres 17.1
Hippocampus, CA2
nTPM: 21.8
1963 Male, age 80, left hemisphere 28.3
2249 Male, age 74, both hemispheres 24.6
2113 Female, age 91, right hemisphere 21.2
1892 Male, age 76, both hemispheres 20.4
1940 Female, age 85, left hemisphere 19.0
2437 Female, age 94, left hemisphere 17.0
Hippocampus, CA3
nTPM: 20.4
2137 Male, age 80, left hemisphere 26.4
2436 Male, age 74, both hemispheres 25.2
1867 Male, age 76, both hemispheres 20.6
1891 Female, age 85, both hemispheres 18.2
2861 Female, age 67, both hemispheres 17.0
2620 Female, age 94, left hemisphere 14.9
Parahippocampal cortex
nTPM: 15.3
2018 Male, age 76, both hemispheres 21.2
1990 Female, age 91, right hemisphere 19.0
1933 Female, age 85, both hemispheres 17.9
1850 Male, age 80, both hemispheres 17.8
2250 Female, age 67, right hemisphere 17.1
2532 Female, age 72, left hemisphere 14.5
2245 Female, age 91, both hemispheres 13.4
2692 Male, age 74, both hemispheres 12.8
2693 Female, age 94, both hemispheres 10.0
2622 Female, age 67, right hemisphere 9.7
Perirhinal gyrus
nTPM: 18.6
1794 Male, age 80, right hemisphere 22.4
1847 Female, age 91, left hemisphere 21.9
1841 Female, age 85, right hemisphere 18.9
2521 Female, age 94, right hemisphere 16.6
2848 Male, age 76, right hemisphere 13.3
Subiculum
nTPM: 18.1
1977 Female, age 85, both hemispheres 25.9
1901 Male, age 80, both hemispheres 20.4
2729 Female, age 91, right hemisphere 20.4
2042 Male, age 76, both hemispheres 19.6
2619 Male, age 74, both hemispheres 15.2
2438 Female, age 94, left hemisphere 6.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.9
Samples: 197

Max nTPM: 117.5
Min nTPM: 23.6
Std nTPM: 12.8
Median nTPM: 53.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 117.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 117.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 88.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 83.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 82.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 81.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 81.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 80.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 79.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 79.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 77.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.3
FF:10153-102I9 76 years, female 21.0
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.5
Pig sample Sample description nTPM
Subiculum
nTPM: 10.8
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.9
Sample A Female 12.3
Sample B Female 10.7
Sample C Male 9.9
Sample D Male 10.3
Dorsal hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.2
Sample A Female 13.6
Sample B Female 11.8
Sample C Male 10.2
Sample D Male 11.0
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.2
Sample A Female 11.2
Sample B Female 12.8
Sample C Male 14.8
Sample D Male 11.2
Ventral hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 12.9
Min nTPM: 10.6
Sample A Female 11.2
Sample B Female 12.3
Sample C Male 12.9
Sample D Male 10.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 10.8
Min nTPM: 6.4
Sample A Male 8.5
Sample B Male 10.8
Sample C Female 6.4
Sample D Female 7.4
Hippocampal formation
nTPM: 7.7
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.5
Sample A Male 6.5
Sample B Male 7.2
Sample C Female 8.4
Sample D Female 8.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763882 Antisense, RP_050921_02_G08, Mouse strain C57BL/6J (56 days, male) 0.0

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