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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
195.1
nTPM
Monaco:
112.5
nTPM
Schmiedel:
558.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
195.1
HPA sample
nTPM
gdT-cell nTPM: 167.1
Samples: 6
Max nTPM: 233.8
Min nTPM: 99.3
P10809_1007
99.3
P10809_1022
204.5
P10809_1041
233.8
P10809_1060
140.8
P10809_1077
172.3
P10809_1098
151.9
MAIT T-cell nTPM: 135.5
Samples: 6
Max nTPM: 173.1
Min nTPM: 60.9
P10809_1006
60.9
P10809_1024
173.1
P10809_1043
172.4
P10809_1062
121.3
P10809_1083
134.2
P10809_1097
150.8
Memory CD4 T-cell nTPM: 195.1
Samples: 6
Max nTPM: 290.7
Min nTPM: 99.2
P10809_1014
99.2
P10809_1026
263.9
P10809_1045
290.7
P10809_1064
149.1
P10809_1086
170.4
P10809_1113
197.5
Memory CD8 T-cell nTPM: 178.9
Samples: 5
Max nTPM: 228.9
Min nTPM: 100.0
P10809_1012
100.0
P10809_1027
228.9
P10809_1046
220.7
P10809_1065
147.1
P10809_1111
197.6
Naive CD4 T-cell nTPM: 151.5
Samples: 6
Max nTPM: 253.2
Min nTPM: 63.1
P10809_1015
63.1
P10809_1030
191.3
P10809_1049
253.2
P10809_1068
116.3
P10809_1085
145.3
P10809_1112
139.8
Naive CD8 T-cell nTPM: 147.8
Samples: 6
Max nTPM: 209.5
Min nTPM: 75.5
P10809_1016
75.5
P10809_1031
209.5
P10809_1050
161.2
P10809_1069
154.5
P10809_1087
154.0
P10809_1110
131.9
T-reg nTPM: 166.6
Samples: 6
Max nTPM: 268.8
Min nTPM: 75.3
P10809_1018
75.3
P10809_1037
185.2
P10809_1056
268.8
P10809_1075
124.4
P10809_1094
183.1
P10809_1106
162.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
112.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 75.5
Samples: 4
Max nTPM: 107.3
Min nTPM: 44.4
RHH5202_R3573
44.4
RHH5230_R3602
74.4
RHH5259_R3631
76.0
RHH5288_R3660
107.3
Effector memory CD8 T-cell nTPM: 54.6
Samples: 4
Max nTPM: 63.9
Min nTPM: 44.4
RHH5203_R3574
44.4
RHH5231_R3603
63.9
RHH5260_R3632
62.1
RHH5289_R3661
47.8
MAIT T-cell nTPM: 64.7
Samples: 4
Max nTPM: 87.9
Min nTPM: 23.7
RHH5233_R3605
61.7
RHH5205_R3576
23.7
RHH5262_R3634
85.3
RHH5297_R3663
87.9
Memory CD4 T-cell TFH nTPM: 112.5
Samples: 4
Max nTPM: 152.0
Min nTPM: 76.2
RHH5300_R3666
152.0
RHH5236_R3608
126.7
RHH5265_R3637
95.1
RHH5208_R3579
76.2
Memory CD4 T-cell Th1 nTPM: 93.2
Samples: 4
Max nTPM: 160.6
Min nTPM: 49.5
RHH5210_R3581
49.5
RHH5302_R3668
160.6
RHH5238_R3610
63.5
RHH5267_R3639
99.2
Memory CD4 T-cell Th1/Th17 nTPM: 98.3
Samples: 4
Max nTPM: 151.0
Min nTPM: 54.7
RHH5303_R3669
151.0
RHH5211_R3582
85.0
RHH5239_R3611
54.7
RHH5268_R3640
102.4
Memory CD4 T-cell Th17 nTPM: 76.3
Samples: 4
Max nTPM: 100.2
Min nTPM: 48.8
RHH5304_R3670
100.2
RHH5212_R3583
76.7
RHH5240_R3612
48.8
RHH5269_R3641
79.3
Memory CD4 T-cell Th2 nTPM: 99.2
Samples: 4
Max nTPM: 138.3
Min nTPM: 75.1
RHH5305_R3671
138.3
RHH5213_R3584
75.1
RHH5241_R3613
90.3
RHH5270_R3642
93.1
Naive CD4 T-cell nTPM: 69.7
Samples: 4
Max nTPM: 102.0
Min nTPM: 37.7
RHH5306_R3672
67.3
RHH5214_R3585
102.0
RHH5242_R3614
37.7
RHH5271_R3643
71.6
Naive CD8 T-cell nTPM: 60.9
Samples: 4
Max nTPM: 97.0
Min nTPM: 31.3
RHH5201_R3572
31.3
RHH5229_R3601
48.7
RHH5258_R3630
97.0
RHH5287_R3659
66.5
Non-Vd2 gdTCR nTPM: 81.1
Samples: 4
Max nTPM: 153.4
Min nTPM: 31.0
RHH5235_R3607
50.2
RHH5264_R3636
89.6
RHH5207_R3578
31.0
RHH5299_R3665
153.4
T-reg nTPM: 72.5
Samples: 4
Max nTPM: 119.0
Min nTPM: 46.8
RHH5301_R3667
119.0
RHH5237_R3609
67.8
RHH5266_R3638
56.2
RHH5209_R3580
46.8
Terminal effector memory CD4 T-cell nTPM: 76.0
Samples: 2
Max nTPM: 93.2
Min nTPM: 58.7
RHH5243_R3615
58.7
RHH5272_R3644
93.2
Terminal effector memory CD8 T-cell nTPM: 100.8
Samples: 4
Max nTPM: 130.0
Min nTPM: 65.8
RHH5232_R3604
65.8
RHH5204_R3575
130.0
RHH5261_R3633
91.2
RHH5296_R3662
116.2
Vd2 gdTCR nTPM: 94.7
Samples: 4
Max nTPM: 133.2
Min nTPM: 44.1
RHH5234_R3606
72.9
RHH5206_R3577
128.6
RHH5263_R3635
44.1
RHH5298_R3664
133.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
