HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:21.5 nTPM
HPA Brain:13.9 nTPM
GTEx:21.5 nTPM
FANTOM5:22.5 Scaled Tags Per Million
Pig:3.9 nTPM
Mouse:1.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023188
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.9
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
2529 Female, age 94, left hemisphere 18.1
2148 Female, age 91, left hemisphere 13.4
1855 Male, age 76, left hemisphere 13.1
1898 Male, age 80, left hemisphere 12.5
2621 Female, age 67, right hemisphere 11.5
1911 Female, age 85, right hemisphere 10.4
Dentate gyrus
nTPM: 11.5
2530 Female, age 94, left hemisphere 19.7
2528 Male, age 74, both hemispheres 11.0
2010 Male, age 76, both hemispheres 10.2
2531 Female, age 67, both hemispheres 9.8
1927 Female, age 91, both hemispheres 9.4
2246 Female, age 85, both hemispheres 8.8
Entorhinal gyrus
nTPM: 12.7
1938 Female, age 85, left hemisphere 17.1
2764 Male, age 80, right hemisphere 15.8
1787 Male, age 76, left hemisphere 13.9
2117 Female, age 91, right hemisphere 12.1
2686 Male, age 75, right hemisphere 8.7
2613 Female, age 94, left hemisphere 8.5
Hippocampus, CA1
nTPM: 8.6
2527 Male, age 74, both hemispheres 11.2
1873 Female, age 85, both hemispheres 10.1
2045 Male, age 76, both hemispheres 9.5
2082 Female, age 91, right hemisphere 8.1
2749 Male, age 80, left hemisphere 4.4
Hippocampus, CA2
nTPM: 13.2
2437 Female, age 94, left hemisphere 18.3
2249 Male, age 74, both hemispheres 13.8
1892 Male, age 76, both hemispheres 13.0
1940 Female, age 85, left hemisphere 12.1
2113 Female, age 91, right hemisphere 11.3
1963 Male, age 80, left hemisphere 10.9
Hippocampus, CA3
nTPM: 9.5
1891 Female, age 85, both hemispheres 14.4
1867 Male, age 76, both hemispheres 13.9
2620 Female, age 94, left hemisphere 9.3
2436 Male, age 74, both hemispheres 8.2
2137 Male, age 80, left hemisphere 6.9
2861 Female, age 67, both hemispheres 4.3
Parahippocampal cortex
nTPM: 11.3
1990 Female, age 91, right hemisphere 14.5
2692 Male, age 74, both hemispheres 13.2
2250 Female, age 67, right hemisphere 12.5
2245 Female, age 91, both hemispheres 11.7
1933 Female, age 85, both hemispheres 11.2
2532 Female, age 72, left hemisphere 10.8
1850 Male, age 80, both hemispheres 10.5
2018 Male, age 76, both hemispheres 10.4
2622 Female, age 67, right hemisphere 9.5
2693 Female, age 94, both hemispheres 8.7
Perirhinal gyrus
nTPM: 10.0
1847 Female, age 91, left hemisphere 12.5
2521 Female, age 94, right hemisphere 10.6
1794 Male, age 80, right hemisphere 10.5
1841 Female, age 85, right hemisphere 8.5
2848 Male, age 76, right hemisphere 7.8
Subiculum
nTPM: 13.9
2042 Male, age 76, both hemispheres 17.6
2438 Female, age 94, left hemisphere 17.3
2729 Female, age 91, right hemisphere 14.3
1977 Female, age 85, both hemispheres 14.1
1901 Male, age 80, both hemispheres 10.7
2619 Male, age 74, both hemispheres 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.5
Samples: 197

Max nTPM: 60.2
Min nTPM: 5.5
Std nTPM: 9.4
Median nTPM: 20.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 60.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 49.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 48.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 47.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 47.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 46.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 44.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 43.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 40.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 39.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 39.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.5
FF:10153-102I9 76 years, female 27.5
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.9
Pig sample Sample description nTPM
Subiculum
nTPM: 3.2
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.9
Sample A Female 3.4
Sample B Female 2.9
Sample C Male 3.3
Sample D Male 3.1
Dorsal hippocampus
nTPM: 3.4
Samples: 4

Max nTPM: 5.3
Min nTPM: 2.4
Sample A Female 5.3
Sample B Female 2.8
Sample C Male 3.0
Sample D Male 2.4
Entorhinal cortex
nTPM: 3.0
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.5
Sample A Female 2.9
Sample B Female 3.1
Sample C Male 3.4
Sample D Male 2.5
Ventral hippocampus
nTPM: 3.9
Samples: 4

Max nTPM: 5.1
Min nTPM: 2.9
Sample A Female 3.1
Sample B Female 2.9
Sample C Male 5.1
Sample D Male 4.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.6
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.1
Sample A Male 2.6
Sample B Male 1.1
Sample C Female 1.3
Sample D Female 1.4
Hippocampal formation
nTPM: 1.9
Samples: 4

Max nTPM: 3.4
Min nTPM: 1.0
Sample A Male 1.6
Sample B Male 1.7
Sample C Female 1.0
Sample D Female 3.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
79541442 Antisense, RP_071018_01_E03, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org