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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
123.8
nTPM
Monaco:
216.5
nTPM
Schmiedel:
293.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.8
HPA sample
nTPM
gdT-cell nTPM: 123.8
Samples: 6
Max nTPM: 169.0
Min nTPM: 90.8
P10809_1007
90.8
P10809_1022
149.2
P10809_1041
169.0
P10809_1060
94.1
P10809_1077
120.2
P10809_1098
119.2
MAIT T-cell nTPM: 98.8
Samples: 6
Max nTPM: 116.5
Min nTPM: 75.4
P10809_1006
75.4
P10809_1024
87.4
P10809_1043
116.5
P10809_1062
103.4
P10809_1083
95.3
P10809_1097
115.0
Memory CD4 T-cell nTPM: 102.0
Samples: 6
Max nTPM: 116.0
Min nTPM: 87.5
P10809_1014
87.5
P10809_1026
116.0
P10809_1045
115.5
P10809_1064
92.3
P10809_1086
94.3
P10809_1113
106.5
Memory CD8 T-cell nTPM: 108.2
Samples: 5
Max nTPM: 136.8
Min nTPM: 94.5
P10809_1012
94.5
P10809_1027
97.0
P10809_1046
136.8
P10809_1065
103.4
P10809_1111
109.4
Naive CD4 T-cell nTPM: 92.0
Samples: 6
Max nTPM: 116.5
Min nTPM: 66.1
P10809_1015
76.9
P10809_1030
96.1
P10809_1049
116.5
P10809_1068
66.1
P10809_1085
81.2
P10809_1112
114.9
Naive CD8 T-cell nTPM: 90.3
Samples: 6
Max nTPM: 98.9
Min nTPM: 70.3
P10809_1016
70.3
P10809_1031
91.3
P10809_1050
96.0
P10809_1069
98.9
P10809_1087
96.1
P10809_1110
89.0
T-reg nTPM: 106.3
Samples: 6
Max nTPM: 134.9
Min nTPM: 82.2
P10809_1018
89.3
P10809_1037
82.2
P10809_1056
134.9
P10809_1075
96.3
P10809_1094
129.9
P10809_1106
105.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
216.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 152.5
Samples: 4
Max nTPM: 239.5
Min nTPM: 87.7
RHH5202_R3573
145.2
RHH5230_R3602
239.5
RHH5259_R3631
87.7
RHH5288_R3660
137.4
Effector memory CD8 T-cell nTPM: 197.5
Samples: 4
Max nTPM: 217.5
Min nTPM: 156.0
RHH5203_R3574
207.2
RHH5231_R3603
217.5
RHH5260_R3632
156.0
RHH5289_R3661
209.3
MAIT T-cell nTPM: 161.9
Samples: 4
Max nTPM: 176.3
Min nTPM: 154.8
RHH5233_R3605
176.3
RHH5205_R3576
154.8
RHH5262_R3634
155.7
RHH5297_R3663
160.8
Memory CD4 T-cell TFH nTPM: 178.3
Samples: 4
Max nTPM: 221.9
Min nTPM: 158.5
RHH5300_R3666
172.4
RHH5236_R3608
221.9
RHH5265_R3637
160.2
RHH5208_R3579
158.5
Memory CD4 T-cell Th1 nTPM: 172.7
Samples: 4
Max nTPM: 188.1
Min nTPM: 153.9
RHH5210_R3581
184.3
RHH5302_R3668
188.1
RHH5238_R3610
153.9
RHH5267_R3639
164.6
Memory CD4 T-cell Th1/Th17 nTPM: 148.2
Samples: 4
Max nTPM: 173.7
Min nTPM: 118.0
RHH5303_R3669
173.0
RHH5211_R3582
173.7
RHH5239_R3611
118.0
RHH5268_R3640
128.2
Memory CD4 T-cell Th17 nTPM: 151.6
Samples: 4
Max nTPM: 178.9
Min nTPM: 121.0
RHH5304_R3670
153.1
RHH5212_R3583
178.9
RHH5240_R3612
153.3
RHH5269_R3641
121.0
Memory CD4 T-cell Th2 nTPM: 166.8
Samples: 4
Max nTPM: 193.8
Min nTPM: 121.3
RHH5305_R3671
173.6
RHH5213_R3584
178.3
RHH5241_R3613
193.8
RHH5270_R3642
121.3
Naive CD4 T-cell nTPM: 163.8
Samples: 4
Max nTPM: 185.6
Min nTPM: 118.8
RHH5306_R3672
172.7
RHH5214_R3585
185.6
RHH5242_R3614
178.0
RHH5271_R3643
118.8
Naive CD8 T-cell nTPM: 118.9
Samples: 4
Max nTPM: 145.6
Min nTPM: 66.1
RHH5201_R3572
132.7
RHH5229_R3601
66.1
RHH5258_R3630
131.1
RHH5287_R3659
145.6
Non-Vd2 gdTCR nTPM: 216.5
Samples: 4
Max nTPM: 236.9
Min nTPM: 183.4
RHH5235_R3607
183.4
RHH5264_R3636
236.9
RHH5207_R3578
226.6
RHH5299_R3665
219.2
T-reg nTPM: 159.5
Samples: 4
Max nTPM: 205.1
Min nTPM: 136.6
RHH5301_R3667
147.4
RHH5237_R3609
205.1
RHH5266_R3638
148.8
RHH5209_R3580
136.6
Terminal effector memory CD4 T-cell nTPM: 196.7
Samples: 2
Max nTPM: 206.1
Min nTPM: 187.2
RHH5243_R3615
187.2
RHH5272_R3644
206.1
Terminal effector memory CD8 T-cell nTPM: 199.9
Samples: 4
Max nTPM: 220.9
Min nTPM: 182.7
RHH5232_R3604
220.9
RHH5204_R3575
195.8
RHH5261_R3633
182.7
RHH5296_R3662
200.0
Vd2 gdTCR nTPM: 175.6
Samples: 4
Max nTPM: 216.0
Min nTPM: 146.9
RHH5234_R3606
182.3
RHH5206_R3577
216.0
RHH5263_R3635
146.9
RHH5298_R3664
157.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
