We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
651.2
nTPM
Monaco:
564.3
nTPM
Schmiedel:
277.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
651.2
HPA sample
nTPM
gdT-cell nTPM: 651.2
Samples: 6
Max nTPM: 820.2
Min nTPM: 494.6
P10809_1007
795.8
P10809_1022
659.7
P10809_1041
820.2
P10809_1060
508.9
P10809_1077
627.9
P10809_1098
494.6
MAIT T-cell nTPM: 468.4
Samples: 6
Max nTPM: 542.9
Min nTPM: 388.7
P10809_1006
513.3
P10809_1024
534.0
P10809_1043
542.9
P10809_1062
434.1
P10809_1083
388.7
P10809_1097
397.4
Memory CD4 T-cell nTPM: 575.1
Samples: 6
Max nTPM: 745.8
Min nTPM: 378.1
P10809_1014
629.6
P10809_1026
745.8
P10809_1045
597.4
P10809_1064
631.8
P10809_1086
467.8
P10809_1113
378.1
Memory CD8 T-cell nTPM: 625.8
Samples: 5
Max nTPM: 736.0
Min nTPM: 388.9
P10809_1012
687.6
P10809_1027
736.0
P10809_1046
602.5
P10809_1065
714.0
P10809_1111
388.9
Naive CD4 T-cell nTPM: 502.2
Samples: 6
Max nTPM: 611.8
Min nTPM: 348.2
P10809_1015
536.8
P10809_1030
611.8
P10809_1049
554.6
P10809_1068
526.0
P10809_1085
436.0
P10809_1112
348.2
Naive CD8 T-cell nTPM: 502.8
Samples: 6
Max nTPM: 640.9
Min nTPM: 223.9
P10809_1016
636.4
P10809_1031
543.9
P10809_1050
522.2
P10809_1069
640.9
P10809_1087
449.4
P10809_1110
223.9
T-reg nTPM: 407.3
Samples: 6
Max nTPM: 671.0
Min nTPM: 282.5
P10809_1018
410.9
P10809_1037
427.4
P10809_1056
671.0
P10809_1075
342.5
P10809_1094
309.5
P10809_1106
282.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
564.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 164.4
Samples: 4
Max nTPM: 242.8
Min nTPM: 105.5
RHH5202_R3573
115.7
RHH5230_R3602
105.5
RHH5259_R3631
242.8
RHH5288_R3660
193.5
Effector memory CD8 T-cell nTPM: 194.0
Samples: 4
Max nTPM: 365.8
Min nTPM: 119.5
RHH5203_R3574
119.5
RHH5231_R3603
157.7
RHH5260_R3632
365.8
RHH5289_R3661
133.1
MAIT T-cell nTPM: 216.6
Samples: 4
Max nTPM: 288.6
Min nTPM: 132.1
RHH5233_R3605
132.1
RHH5205_R3576
288.6
RHH5262_R3634
205.1
RHH5297_R3663
240.5
Memory CD4 T-cell TFH nTPM: 195.0
Samples: 4
Max nTPM: 284.0
Min nTPM: 140.7
RHH5300_R3666
183.4
RHH5236_R3608
284.0
RHH5265_R3637
140.7
RHH5208_R3579
171.9
Memory CD4 T-cell Th1 nTPM: 264.6
Samples: 4
Max nTPM: 390.6
Min nTPM: 107.9
RHH5210_R3581
107.9
RHH5302_R3668
390.6
RHH5238_R3610
291.5
RHH5267_R3639
268.3
Memory CD4 T-cell Th1/Th17 nTPM: 287.9
Samples: 4
Max nTPM: 327.4
Min nTPM: 226.1
RHH5303_R3669
327.4
RHH5211_R3582
282.2
RHH5239_R3611
226.1
RHH5268_R3640
315.8
Memory CD4 T-cell Th17 nTPM: 283.8
Samples: 4
Max nTPM: 311.7
Min nTPM: 255.0
RHH5304_R3670
297.3
RHH5212_R3583
311.7
RHH5240_R3612
271.1
RHH5269_R3641
255.0
Memory CD4 T-cell Th2 nTPM: 256.5
Samples: 4
Max nTPM: 374.6
Min nTPM: 196.3
RHH5305_R3671
374.6
RHH5213_R3584
241.3
RHH5241_R3613
213.7
RHH5270_R3642
196.3
Naive CD4 T-cell nTPM: 187.3
Samples: 4
Max nTPM: 297.1
Min nTPM: 88.9
RHH5306_R3672
163.3
RHH5214_R3585
297.1
RHH5242_R3614
88.9
RHH5271_R3643
199.9
Naive CD8 T-cell nTPM: 147.6
Samples: 4
Max nTPM: 225.9
Min nTPM: 88.1
RHH5201_R3572
88.1
RHH5229_R3601
225.9
RHH5258_R3630
120.0
RHH5287_R3659
156.4
Non-Vd2 gdTCR nTPM: 452.5
Samples: 4
Max nTPM: 703.0
Min nTPM: 199.1
RHH5235_R3607
199.1
RHH5264_R3636
543.4
RHH5207_R3578
364.6
RHH5299_R3665
703.0
T-reg nTPM: 179.4
Samples: 4
Max nTPM: 228.2
Min nTPM: 142.3
RHH5301_R3667
228.2
RHH5237_R3609
180.8
RHH5266_R3638
166.3
RHH5209_R3580
142.3
Terminal effector memory CD4 T-cell nTPM: 263.8
Samples: 2
Max nTPM: 294.9
Min nTPM: 232.6
RHH5243_R3615
232.6
RHH5272_R3644
294.9
Terminal effector memory CD8 T-cell nTPM: 564.3
Samples: 4
Max nTPM: 877.2
Min nTPM: 122.0
RHH5232_R3604
122.0
RHH5204_R3575
877.2
RHH5261_R3633
776.5
RHH5296_R3662
481.4
Vd2 gdTCR nTPM: 459.8
Samples: 4
Max nTPM: 1007.5
Min nTPM: 129.4
RHH5234_R3606
129.4
RHH5206_R3577
1007.5
RHH5263_R3635
308.4
RHH5298_R3664
393.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.