HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:8.1 nTPM
HPA Brain:19.6 nTPM
GTEx:8.1 nTPM
FANTOM5:2.8 Scaled Tags Per Million
Pig:5.6 nTPM
Mouse:5.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.6
Sample id Sample description nTPM
Hippocampus
nTPM: 18.5
1855 Male, age 76, left hemisphere 24.7
1898 Male, age 80, left hemisphere 21.1
2148 Female, age 91, left hemisphere 20.4
2621 Female, age 67, right hemisphere 18.3
1911 Female, age 85, right hemisphere 13.7
2529 Female, age 94, left hemisphere 12.8
Dentate gyrus
nTPM: 19.5
2530 Female, age 94, left hemisphere 21.7
2010 Male, age 76, both hemispheres 21.4
2531 Female, age 67, both hemispheres 21.3
1927 Female, age 91, both hemispheres 18.7
2246 Female, age 85, both hemispheres 17.2
2528 Male, age 74, both hemispheres 16.5
Entorhinal gyrus
nTPM: 19.6
2613 Female, age 94, left hemisphere 26.9
1938 Female, age 85, left hemisphere 22.7
2764 Male, age 80, right hemisphere 19.9
1787 Male, age 76, left hemisphere 19.3
2686 Male, age 75, right hemisphere 16.7
2117 Female, age 91, right hemisphere 11.9
Hippocampus, CA1
nTPM: 17.5
1873 Female, age 85, both hemispheres 22.0
2749 Male, age 80, left hemisphere 20.5
2045 Male, age 76, both hemispheres 18.4
2082 Female, age 91, right hemisphere 13.7
2527 Male, age 74, both hemispheres 12.7
Hippocampus, CA2
nTPM: 17.1
1963 Male, age 80, left hemisphere 21.6
1892 Male, age 76, both hemispheres 19.0
2437 Female, age 94, left hemisphere 18.3
1940 Female, age 85, left hemisphere 16.9
2113 Female, age 91, right hemisphere 15.2
2249 Male, age 74, both hemispheres 11.7
Hippocampus, CA3
nTPM: 16.9
2861 Female, age 67, both hemispheres 29.1
2620 Female, age 94, left hemisphere 17.9
2137 Male, age 80, left hemisphere 16.8
1867 Male, age 76, both hemispheres 13.7
1891 Female, age 85, both hemispheres 13.1
2436 Male, age 74, both hemispheres 10.5
Parahippocampal cortex
nTPM: 18.0
2532 Female, age 72, left hemisphere 21.2
2622 Female, age 67, right hemisphere 20.8
1933 Female, age 85, both hemispheres 19.4
1850 Male, age 80, both hemispheres 19.3
1990 Female, age 91, right hemisphere 17.9
2692 Male, age 74, both hemispheres 17.9
2245 Female, age 91, both hemispheres 16.2
2018 Male, age 76, both hemispheres 16.1
2250 Female, age 67, right hemisphere 16.1
2693 Female, age 94, both hemispheres 15.7
Perirhinal gyrus
nTPM: 18.8
1847 Female, age 91, left hemisphere 20.2
1841 Female, age 85, right hemisphere 19.6
1794 Male, age 80, right hemisphere 19.5
2521 Female, age 94, right hemisphere 18.1
2848 Male, age 76, right hemisphere 16.6
Subiculum
nTPM: 14.1
2438 Female, age 94, left hemisphere 15.9
1977 Female, age 85, both hemispheres 15.5
2729 Female, age 91, right hemisphere 14.8
2619 Male, age 74, both hemispheres 13.8
1901 Male, age 80, both hemispheres 12.5
2042 Male, age 76, both hemispheres 12.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.1
Samples: 197

Max nTPM: 29.9
Min nTPM: 1.0
Std nTPM: 4.5
Median nTPM: 7.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 29.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 24.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 21.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 20.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 18.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 18.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 18.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 18.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 17.8
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 17.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 2.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2.8
FF:10153-102I9 76 years, female 3.5
FF:10169-103B7 60 years, female 2.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.6
Pig sample Sample description nTPM
Subiculum
nTPM: 4.9
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.3
Sample A Female 3.3
Sample B Female 5.5
Sample C Male 5.0
Sample D Male 5.7
Dorsal hippocampus
nTPM: 4.4
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.2
Sample A Female 3.2
Sample B Female 4.8
Sample C Male 4.5
Sample D Male 4.9
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.8
Sample A Female 5.3
Sample B Female 4.8
Sample C Male 5.1
Sample D Male 7.1
Ventral hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.3
Sample A Female 5.5
Sample B Female 6.1
Sample C Male 4.3
Sample D Male 4.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.9
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.6
Sample A Male 5.6
Sample B Male 6.5
Sample C Female 5.8
Sample D Female 5.7
Hippocampal formation
nTPM: 5.7
Samples: 4

Max nTPM: 6.4
Min nTPM: 5.4
Sample A Male 6.4
Sample B Male 5.4
Sample C Female 5.4
Sample D Female 5.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68161459 Antisense, RP_041122_01_C12, Mouse strain C57BL/6J (56 days, male) 0.0

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