HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:36.7 nTPM
HPA Brain:26.8 nTPM
GTEx:36.7 nTPM
FANTOM5:32.2 Scaled Tags Per Million
Pig:15.6 nTPM
Mouse:2.9 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB003685
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.8
Sample id Sample description nTPM
Hippocampus
nTPM: 25.7
2529 Female, age 94, left hemisphere 37.9
1855 Male, age 76, left hemisphere 28.0
1898 Male, age 80, left hemisphere 25.1
2621 Female, age 67, right hemisphere 22.0
1911 Female, age 85, right hemisphere 21.0
2148 Female, age 91, left hemisphere 20.1
Dentate gyrus
nTPM: 19.2
2010 Male, age 76, both hemispheres 23.9
2530 Female, age 94, left hemisphere 20.7
2246 Female, age 85, both hemispheres 20.5
2531 Female, age 67, both hemispheres 18.0
1927 Female, age 91, both hemispheres 16.5
2528 Male, age 74, both hemispheres 15.6
Entorhinal gyrus
nTPM: 17.1
2686 Male, age 75, right hemisphere 20.1
1938 Female, age 85, left hemisphere 19.1
2117 Female, age 91, right hemisphere 18.6
1787 Male, age 76, left hemisphere 17.2
2764 Male, age 80, right hemisphere 16.3
2613 Female, age 94, left hemisphere 11.3
Hippocampus, CA1
nTPM: 26.8
2045 Male, age 76, both hemispheres 39.0
2749 Male, age 80, left hemisphere 29.5
2527 Male, age 74, both hemispheres 24.5
1873 Female, age 85, both hemispheres 22.1
2082 Female, age 91, right hemisphere 18.9
Hippocampus, CA2
nTPM: 20.3
1892 Male, age 76, both hemispheres 27.8
1963 Male, age 80, left hemisphere 24.6
1940 Female, age 85, left hemisphere 19.1
2249 Male, age 74, both hemispheres 17.6
2113 Female, age 91, right hemisphere 16.8
2437 Female, age 94, left hemisphere 15.9
Hippocampus, CA3
nTPM: 20.4
2620 Female, age 94, left hemisphere 29.0
1867 Male, age 76, both hemispheres 22.4
1891 Female, age 85, both hemispheres 20.7
2137 Male, age 80, left hemisphere 18.2
2861 Female, age 67, both hemispheres 16.4
2436 Male, age 74, both hemispheres 15.6
Parahippocampal cortex
nTPM: 17.8
2692 Male, age 74, both hemispheres 20.7
2245 Female, age 91, both hemispheres 20.5
1933 Female, age 85, both hemispheres 19.5
2532 Female, age 72, left hemisphere 19.3
1850 Male, age 80, both hemispheres 18.1
2250 Female, age 67, right hemisphere 17.7
2018 Male, age 76, both hemispheres 16.9
2622 Female, age 67, right hemisphere 16.8
1990 Female, age 91, right hemisphere 16.3
2693 Female, age 94, both hemispheres 12.2
Perirhinal gyrus
nTPM: 16.1
1841 Female, age 85, right hemisphere 17.8
1847 Female, age 91, left hemisphere 17.3
1794 Male, age 80, right hemisphere 16.3
2848 Male, age 76, right hemisphere 15.9
2521 Female, age 94, right hemisphere 13.1
Subiculum
nTPM: 20.4
2042 Male, age 76, both hemispheres 29.4
2438 Female, age 94, left hemisphere 22.8
1901 Male, age 80, both hemispheres 21.1
2729 Female, age 91, right hemisphere 18.7
1977 Female, age 85, both hemispheres 15.4
2619 Male, age 74, both hemispheres 15.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.7
Samples: 197

Max nTPM: 87.4
Min nTPM: 15.8
Std nTPM: 10.5
Median nTPM: 34.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 87.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 75.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 67.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 65.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 63.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 63.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 62.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 55.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 55.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 55.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 54.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.2
FF:10169-103B7 60 years, female 35.3
FF:10153-102I9 76 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.6
Pig sample Sample description nTPM
Subiculum
nTPM: 12.3
Samples: 4

Max nTPM: 15.7
Min nTPM: 10.6
Sample A Female 15.7
Sample B Female 10.6
Sample C Male 11.3
Sample D Male 11.4
Dorsal hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 20.7
Min nTPM: 13.1
Sample A Female 20.7
Sample B Female 15.2
Sample C Male 13.1
Sample D Male 13.2
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 15.4
Min nTPM: 12.0
Sample A Female 12.1
Sample B Female 15.4
Sample C Male 12.4
Sample D Male 12.0
Ventral hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 16.9
Min nTPM: 11.5
Sample A Female 16.1
Sample B Female 11.5
Sample C Male 16.9
Sample D Male 16.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.6
Samples: 4

Max nTPM: 2.2
Min nTPM: 0.8
Sample A Male 1.4
Sample B Male 0.8
Sample C Female 1.8
Sample D Female 2.2
Hippocampal formation
nTPM: 2.9
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.0
Sample A Male 2.0
Sample B Male 2.8
Sample C Female 3.6
Sample D Female 3.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
1416 Antisense, RP_Baylor_103180, Mouse strain C57BL/6J (56 days, male) 7.5
1417 Antisense, RP_Baylor_103180, Mouse strain C57BL/6J (56 days, male) 5.4

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