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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
149.7
nTPM
Monaco:
122.1
nTPM
Schmiedel:
41.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
149.7
HPA sample
nTPM
gdT-cell nTPM: 149.7
Samples: 6
Max nTPM: 180.8
Min nTPM: 106.4
P10809_1007
106.4
P10809_1022
168.1
P10809_1041
180.8
P10809_1060
131.2
P10809_1077
151.7
P10809_1098
160.1
MAIT T-cell nTPM: 148.3
Samples: 6
Max nTPM: 175.6
Min nTPM: 73.6
P10809_1006
73.6
P10809_1024
139.4
P10809_1043
170.6
P10809_1062
163.4
P10809_1083
167.1
P10809_1097
175.6
Memory CD4 T-cell nTPM: 136.0
Samples: 6
Max nTPM: 164.2
Min nTPM: 89.8
P10809_1014
89.8
P10809_1026
137.9
P10809_1045
140.5
P10809_1064
150.8
P10809_1086
164.2
P10809_1113
132.7
Memory CD8 T-cell nTPM: 144.9
Samples: 5
Max nTPM: 170.3
Min nTPM: 89.5
P10809_1012
89.5
P10809_1027
156.2
P10809_1046
170.3
P10809_1065
168.9
P10809_1111
139.5
Naive CD4 T-cell nTPM: 118.6
Samples: 6
Max nTPM: 158.7
Min nTPM: 58.9
P10809_1015
58.9
P10809_1030
132.2
P10809_1049
158.7
P10809_1068
116.3
P10809_1085
142.0
P10809_1112
103.3
Naive CD8 T-cell nTPM: 117.6
Samples: 6
Max nTPM: 160.0
Min nTPM: 68.1
P10809_1016
68.1
P10809_1031
104.6
P10809_1050
140.9
P10809_1069
140.6
P10809_1087
160.0
P10809_1110
91.3
T-reg nTPM: 147.0
Samples: 6
Max nTPM: 162.1
Min nTPM: 89.9
P10809_1018
89.9
P10809_1037
153.2
P10809_1056
156.6
P10809_1075
158.5
P10809_1094
162.1
P10809_1106
161.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
122.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.1
Samples: 4
Max nTPM: 107.4
Min nTPM: 55.4
RHH5202_R3573
61.5
RHH5230_R3602
60.0
RHH5259_R3631
55.4
RHH5288_R3660
107.4
Effector memory CD8 T-cell nTPM: 90.8
Samples: 4
Max nTPM: 123.0
Min nTPM: 65.3
RHH5203_R3574
86.9
RHH5231_R3603
123.0
RHH5260_R3632
87.8
RHH5289_R3661
65.3
MAIT T-cell nTPM: 103.3
Samples: 4
Max nTPM: 118.8
Min nTPM: 65.9
RHH5233_R3605
116.7
RHH5205_R3576
65.9
RHH5262_R3634
111.7
RHH5297_R3663
118.8
Memory CD4 T-cell TFH nTPM: 98.2
Samples: 4
Max nTPM: 127.3
Min nTPM: 72.4
RHH5300_R3666
96.8
RHH5236_R3608
127.3
RHH5265_R3637
72.4
RHH5208_R3579
96.3
Memory CD4 T-cell Th1 nTPM: 91.3
Samples: 4
Max nTPM: 132.6
Min nTPM: 56.1
RHH5210_R3581
56.1
RHH5302_R3668
132.6
RHH5238_R3610
99.8
RHH5267_R3639
76.8
Memory CD4 T-cell Th1/Th17 nTPM: 88.6
Samples: 4
Max nTPM: 103.8
Min nTPM: 67.7
RHH5303_R3669
103.8
RHH5211_R3582
102.6
RHH5239_R3611
67.7
RHH5268_R3640
80.4
Memory CD4 T-cell Th17 nTPM: 71.1
Samples: 4
Max nTPM: 78.2
Min nTPM: 65.2
RHH5304_R3670
73.9
RHH5212_R3583
78.2
RHH5240_R3612
67.2
RHH5269_R3641
65.2
Memory CD4 T-cell Th2 nTPM: 73.6
Samples: 4
Max nTPM: 87.5
Min nTPM: 62.7
RHH5305_R3671
87.5
RHH5213_R3584
64.9
RHH5241_R3613
79.2
RHH5270_R3642
62.7
Naive CD4 T-cell nTPM: 76.6
Samples: 4
Max nTPM: 107.0
Min nTPM: 55.4
RHH5306_R3672
87.4
RHH5214_R3585
107.0
RHH5242_R3614
56.5
RHH5271_R3643
55.4
Naive CD8 T-cell nTPM: 65.0
Samples: 4
Max nTPM: 78.4
Min nTPM: 50.8
RHH5201_R3572
78.4
RHH5229_R3601
59.7
RHH5258_R3630
71.2
RHH5287_R3659
50.8
Non-Vd2 gdTCR nTPM: 105.0
Samples: 4
Max nTPM: 136.2
Min nTPM: 67.9
RHH5235_R3607
67.9
RHH5264_R3636
127.0
RHH5207_R3578
88.8
RHH5299_R3665
136.2
T-reg nTPM: 85.4
Samples: 4
Max nTPM: 108.4
Min nTPM: 50.1
RHH5301_R3667
108.4
RHH5237_R3609
95.2
RHH5266_R3638
50.1
RHH5209_R3580
87.7
Terminal effector memory CD4 T-cell nTPM: 90.5
Samples: 2
Max nTPM: 98.9
Min nTPM: 82.1
RHH5243_R3615
82.1
RHH5272_R3644
98.9
Terminal effector memory CD8 T-cell nTPM: 122.1
Samples: 4
Max nTPM: 190.6
Min nTPM: 94.8
RHH5232_R3604
98.4
RHH5204_R3575
190.6
RHH5261_R3633
94.8
RHH5296_R3662
104.5
Vd2 gdTCR nTPM: 110.5
Samples: 4
Max nTPM: 160.2
Min nTPM: 76.9
RHH5234_R3606
78.3
RHH5206_R3577
160.2
RHH5263_R3635
76.9
RHH5298_R3664
126.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
