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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
169.7
nTPM
Monaco:
249.0
nTPM
Schmiedel:
221.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
169.7
HPA sample
nTPM
gdT-cell nTPM: 146.2
Samples: 6
Max nTPM: 192.3
Min nTPM: 116.8
P10809_1007
116.8
P10809_1022
192.3
P10809_1041
154.5
P10809_1060
126.1
P10809_1077
140.3
P10809_1098
147.3
MAIT T-cell nTPM: 143.3
Samples: 6
Max nTPM: 207.9
Min nTPM: 109.6
P10809_1006
122.8
P10809_1024
207.9
P10809_1043
127.9
P10809_1062
131.2
P10809_1083
109.6
P10809_1097
160.5
Memory CD4 T-cell nTPM: 133.6
Samples: 6
Max nTPM: 156.8
Min nTPM: 107.9
P10809_1014
107.9
P10809_1026
156.8
P10809_1045
148.7
P10809_1064
128.6
P10809_1086
135.6
P10809_1113
124.2
Memory CD8 T-cell nTPM: 141.2
Samples: 5
Max nTPM: 173.1
Min nTPM: 104.2
P10809_1012
104.2
P10809_1027
173.1
P10809_1046
159.7
P10809_1065
140.4
P10809_1111
128.5
Naive CD4 T-cell nTPM: 121.8
Samples: 6
Max nTPM: 187.7
Min nTPM: 85.9
P10809_1015
85.9
P10809_1030
122.2
P10809_1049
187.7
P10809_1068
100.7
P10809_1085
116.3
P10809_1112
117.7
Naive CD8 T-cell nTPM: 130.7
Samples: 6
Max nTPM: 157.5
Min nTPM: 99.6
P10809_1016
99.6
P10809_1031
157.5
P10809_1050
130.7
P10809_1069
126.8
P10809_1087
133.5
P10809_1110
136.3
T-reg nTPM: 169.7
Samples: 6
Max nTPM: 202.8
Min nTPM: 126.2
P10809_1018
126.2
P10809_1037
195.2
P10809_1056
202.8
P10809_1075
151.8
P10809_1094
185.3
P10809_1106
157.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
249.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 176.9
Samples: 4
Max nTPM: 204.9
Min nTPM: 129.8
RHH5202_R3573
203.4
RHH5230_R3602
169.3
RHH5259_R3631
129.8
RHH5288_R3660
204.9
Effector memory CD8 T-cell nTPM: 249.0
Samples: 4
Max nTPM: 307.8
Min nTPM: 156.9
RHH5203_R3574
307.8
RHH5231_R3603
251.7
RHH5260_R3632
156.9
RHH5289_R3661
279.6
MAIT T-cell nTPM: 203.4
Samples: 4
Max nTPM: 232.1
Min nTPM: 151.5
RHH5233_R3605
232.1
RHH5205_R3576
217.8
RHH5262_R3634
212.3
RHH5297_R3663
151.5
Memory CD4 T-cell TFH nTPM: 180.5
Samples: 4
Max nTPM: 198.0
Min nTPM: 162.8
RHH5300_R3666
162.8
RHH5236_R3608
166.8
RHH5265_R3637
198.0
RHH5208_R3579
194.5
Memory CD4 T-cell Th1 nTPM: 155.9
Samples: 4
Max nTPM: 182.5
Min nTPM: 106.7
RHH5210_R3581
182.5
RHH5302_R3668
170.2
RHH5238_R3610
106.7
RHH5267_R3639
164.3
Memory CD4 T-cell Th1/Th17 nTPM: 168.2
Samples: 4
Max nTPM: 227.8
Min nTPM: 89.7
RHH5303_R3669
210.5
RHH5211_R3582
227.8
RHH5239_R3611
89.7
RHH5268_R3640
144.8
Memory CD4 T-cell Th17 nTPM: 189.5
Samples: 4
Max nTPM: 212.3
Min nTPM: 153.7
RHH5304_R3670
212.3
RHH5212_R3583
198.9
RHH5240_R3612
192.9
RHH5269_R3641
153.7
Memory CD4 T-cell Th2 nTPM: 209.3
Samples: 4
Max nTPM: 244.2
Min nTPM: 147.8
RHH5305_R3671
224.2
RHH5213_R3584
244.2
RHH5241_R3613
147.8
RHH5270_R3642
221.0
Naive CD4 T-cell nTPM: 172.0
Samples: 4
Max nTPM: 188.5
Min nTPM: 135.2
RHH5306_R3672
176.1
RHH5214_R3585
188.2
RHH5242_R3614
135.2
RHH5271_R3643
188.5
Naive CD8 T-cell nTPM: 162.3
Samples: 4
Max nTPM: 211.0
Min nTPM: 79.3
RHH5201_R3572
211.0
RHH5229_R3601
79.3
RHH5258_R3630
176.7
RHH5287_R3659
182.0
Non-Vd2 gdTCR nTPM: 220.1
Samples: 4
Max nTPM: 281.4
Min nTPM: 164.0
RHH5235_R3607
164.0
RHH5264_R3636
220.8
RHH5207_R3578
281.4
RHH5299_R3665
214.1
T-reg nTPM: 197.5
Samples: 4
Max nTPM: 232.1
Min nTPM: 167.2
RHH5301_R3667
213.4
RHH5237_R3609
232.1
RHH5266_R3638
177.2
RHH5209_R3580
167.2
Terminal effector memory CD4 T-cell nTPM: 193.2
Samples: 2
Max nTPM: 250.4
Min nTPM: 135.9
RHH5243_R3615
135.9
RHH5272_R3644
250.4
Terminal effector memory CD8 T-cell nTPM: 211.6
Samples: 4
Max nTPM: 257.7
Min nTPM: 161.3
RHH5232_R3604
228.2
RHH5204_R3575
199.2
RHH5261_R3633
161.3
RHH5296_R3662
257.7
Vd2 gdTCR nTPM: 185.6
Samples: 4
Max nTPM: 216.6
Min nTPM: 147.4
RHH5234_R3606
192.2
RHH5206_R3577
216.6
RHH5263_R3635
186.3
RHH5298_R3664
147.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.