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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
17.1
nTPM
Monaco:
15.5
nTPM
Schmiedel:
2.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.1
HPA sample
nTPM
gdT-cell nTPM: 13.2
Samples: 6
Max nTPM: 19.0
Min nTPM: 8.0
P10809_1007
8.0
P10809_1022
15.7
P10809_1041
19.0
P10809_1060
14.7
P10809_1077
8.7
P10809_1098
13.2
MAIT T-cell nTPM: 12.7
Samples: 6
Max nTPM: 17.4
Min nTPM: 9.6
P10809_1006
9.6
P10809_1024
17.0
P10809_1043
17.4
P10809_1062
10.1
P10809_1083
11.9
P10809_1097
10.4
Memory CD4 T-cell nTPM: 12.6
Samples: 6
Max nTPM: 15.6
Min nTPM: 10.0
P10809_1014
10.0
P10809_1026
13.4
P10809_1045
11.4
P10809_1064
15.0
P10809_1086
10.2
P10809_1113
15.6
Memory CD8 T-cell nTPM: 10.0
Samples: 5
Max nTPM: 11.2
Min nTPM: 8.3
P10809_1012
11.2
P10809_1027
11.0
P10809_1046
8.8
P10809_1065
8.3
P10809_1111
10.8
Naive CD4 T-cell nTPM: 12.2
Samples: 6
Max nTPM: 15.5
Min nTPM: 7.9
P10809_1015
9.6
P10809_1030
12.8
P10809_1049
15.5
P10809_1068
7.9
P10809_1085
15.0
P10809_1112
12.3
Naive CD8 T-cell nTPM: 11.1
Samples: 6
Max nTPM: 16.9
Min nTPM: 8.1
P10809_1016
9.4
P10809_1031
11.1
P10809_1050
9.1
P10809_1069
11.8
P10809_1087
8.1
P10809_1110
16.9
T-reg nTPM: 17.1
Samples: 6
Max nTPM: 23.5
Min nTPM: 7.5
P10809_1018
14.5
P10809_1037
11.0
P10809_1056
22.8
P10809_1075
23.5
P10809_1094
7.5
P10809_1106
23.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.5
Samples: 4
Max nTPM: 14.2
Min nTPM: 9.4
RHH5202_R3573
14.2
RHH5230_R3602
9.4
RHH5259_R3631
11.4
RHH5288_R3660
11.1
Effector memory CD8 T-cell nTPM: 11.8
Samples: 4
Max nTPM: 14.1
Min nTPM: 8.7
RHH5203_R3574
12.6
RHH5231_R3603
14.1
RHH5260_R3632
8.7
RHH5289_R3661
11.7
MAIT T-cell nTPM: 8.6
Samples: 4
Max nTPM: 11.3
Min nTPM: 5.3
RHH5233_R3605
10.0
RHH5205_R3576
7.8
RHH5262_R3634
11.3
RHH5297_R3663
5.3
Memory CD4 T-cell TFH nTPM: 15.5
Samples: 4
Max nTPM: 21.8
Min nTPM: 9.4
RHH5300_R3666
10.3
RHH5236_R3608
21.8
RHH5265_R3637
20.3
RHH5208_R3579
9.4
Memory CD4 T-cell Th1 nTPM: 11.8
Samples: 4
Max nTPM: 15.9
Min nTPM: 6.1
RHH5210_R3581
15.9
RHH5302_R3668
15.9
RHH5238_R3610
6.1
RHH5267_R3639
9.4
Memory CD4 T-cell Th1/Th17 nTPM: 12.2
Samples: 4
Max nTPM: 19.5
Min nTPM: 9.5
RHH5303_R3669
19.5
RHH5211_R3582
9.6
RHH5239_R3611
10.1
RHH5268_R3640
9.5
Memory CD4 T-cell Th17 nTPM: 10.5
Samples: 4
Max nTPM: 11.5
Min nTPM: 9.3
RHH5304_R3670
11.5
RHH5212_R3583
10.8
RHH5240_R3612
10.2
RHH5269_R3641
9.3
Memory CD4 T-cell Th2 nTPM: 13.0
Samples: 4
Max nTPM: 15.3
Min nTPM: 9.9
RHH5305_R3671
13.6
RHH5213_R3584
13.3
RHH5241_R3613
9.9
RHH5270_R3642
15.3
Naive CD4 T-cell nTPM: 12.2
Samples: 4
Max nTPM: 15.4
Min nTPM: 8.7
RHH5306_R3672
9.3
RHH5214_R3585
15.4
RHH5242_R3614
8.7
RHH5271_R3643
15.3
Naive CD8 T-cell nTPM: 11.4
Samples: 4
Max nTPM: 14.1
Min nTPM: 8.7
RHH5201_R3572
8.7
RHH5229_R3601
10.4
RHH5258_R3630
12.4
RHH5287_R3659
14.1
Non-Vd2 gdTCR nTPM: 9.8
Samples: 4
Max nTPM: 12.5
Min nTPM: 8.0
RHH5235_R3607
10.5
RHH5264_R3636
8.0
RHH5207_R3578
8.1
RHH5299_R3665
12.5
T-reg nTPM: 11.5
Samples: 4
Max nTPM: 16.1
Min nTPM: 7.7
RHH5301_R3667
16.1
RHH5237_R3609
7.7
RHH5266_R3638
14.5
RHH5209_R3580
7.8
Terminal effector memory CD4 T-cell nTPM: 10.9
Samples: 2
Max nTPM: 13.3
Min nTPM: 8.4
RHH5243_R3615
8.4
RHH5272_R3644
13.3
Terminal effector memory CD8 T-cell nTPM: 11.2
Samples: 4
Max nTPM: 14.6
Min nTPM: 7.0
RHH5232_R3604
12.4
RHH5204_R3575
14.6
RHH5261_R3633
7.0
RHH5296_R3662
10.7
Vd2 gdTCR nTPM: 11.6
Samples: 4
Max nTPM: 16.0
Min nTPM: 5.2
RHH5234_R3606
16.0
RHH5206_R3577
15.4
RHH5263_R3635
5.2
RHH5298_R3664
9.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
