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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
174.1
nTPM
Monaco:
416.9
nTPM
Schmiedel:
373.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
174.1
HPA sample
nTPM
gdT-cell nTPM: 79.4
Samples: 6
Max nTPM: 98.2
Min nTPM: 68.2
P10809_1007
71.5
P10809_1022
98.2
P10809_1041
70.2
P10809_1060
68.2
P10809_1077
91.7
P10809_1098
76.6
MAIT T-cell nTPM: 77.0
Samples: 6
Max nTPM: 93.6
Min nTPM: 44.7
P10809_1006
93.6
P10809_1024
93.6
P10809_1043
44.7
P10809_1062
58.7
P10809_1083
81.6
P10809_1097
89.7
Memory CD4 T-cell nTPM: 121.1
Samples: 6
Max nTPM: 155.3
Min nTPM: 102.8
P10809_1014
155.3
P10809_1026
110.2
P10809_1045
102.8
P10809_1064
103.3
P10809_1086
128.9
P10809_1113
126.3
Memory CD8 T-cell nTPM: 102.8
Samples: 5
Max nTPM: 131.2
Min nTPM: 63.9
P10809_1012
131.2
P10809_1027
117.8
P10809_1046
63.9
P10809_1065
86.7
P10809_1111
114.5
Naive CD4 T-cell nTPM: 92.2
Samples: 6
Max nTPM: 140.0
Min nTPM: 75.8
P10809_1015
140.0
P10809_1030
88.7
P10809_1049
77.3
P10809_1068
76.8
P10809_1085
94.4
P10809_1112
75.8
Naive CD8 T-cell nTPM: 87.8
Samples: 6
Max nTPM: 97.2
Min nTPM: 72.6
P10809_1016
97.2
P10809_1031
94.7
P10809_1050
72.6
P10809_1069
91.5
P10809_1087
94.5
P10809_1110
76.3
T-reg nTPM: 174.1
Samples: 6
Max nTPM: 203.9
Min nTPM: 156.9
P10809_1018
181.3
P10809_1037
170.4
P10809_1056
156.9
P10809_1075
158.2
P10809_1094
173.7
P10809_1106
203.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
416.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 342.2
Samples: 4
Max nTPM: 374.5
Min nTPM: 301.9
RHH5202_R3573
340.7
RHH5230_R3602
351.5
RHH5259_R3631
301.9
RHH5288_R3660
374.5
Effector memory CD8 T-cell nTPM: 366.1
Samples: 4
Max nTPM: 406.0
Min nTPM: 345.0
RHH5203_R3574
345.0
RHH5231_R3603
356.9
RHH5260_R3632
356.4
RHH5289_R3661
406.0
MAIT T-cell nTPM: 235.8
Samples: 4
Max nTPM: 283.5
Min nTPM: 198.0
RHH5233_R3605
283.5
RHH5205_R3576
198.0
RHH5262_R3634
235.8
RHH5297_R3663
225.7
Memory CD4 T-cell TFH nTPM: 416.9
Samples: 4
Max nTPM: 456.9
Min nTPM: 389.8
RHH5300_R3666
389.8
RHH5236_R3608
395.0
RHH5265_R3637
456.9
RHH5208_R3579
425.7
Memory CD4 T-cell Th1 nTPM: 327.7
Samples: 4
Max nTPM: 355.6
Min nTPM: 285.9
RHH5210_R3581
285.9
RHH5302_R3668
350.5
RHH5238_R3610
318.8
RHH5267_R3639
355.6
Memory CD4 T-cell Th1/Th17 nTPM: 347.9
Samples: 4
Max nTPM: 364.2
Min nTPM: 332.8
RHH5303_R3669
357.0
RHH5211_R3582
364.2
RHH5239_R3611
332.8
RHH5268_R3640
337.5
Memory CD4 T-cell Th17 nTPM: 414.6
Samples: 4
Max nTPM: 572.2
Min nTPM: 332.7
RHH5304_R3670
404.5
RHH5212_R3583
332.7
RHH5240_R3612
572.2
RHH5269_R3641
348.9
Memory CD4 T-cell Th2 nTPM: 407.2
Samples: 4
Max nTPM: 438.7
Min nTPM: 369.5
RHH5305_R3671
438.7
RHH5213_R3584
369.5
RHH5241_R3613
399.8
RHH5270_R3642
420.6
Naive CD4 T-cell nTPM: 293.2
Samples: 4
Max nTPM: 311.4
Min nTPM: 256.6
RHH5306_R3672
299.7
RHH5214_R3585
256.6
RHH5242_R3614
311.4
RHH5271_R3643
305.1
Naive CD8 T-cell nTPM: 265.2
Samples: 4
Max nTPM: 295.2
Min nTPM: 221.9
RHH5201_R3572
295.2
RHH5229_R3601
221.9
RHH5258_R3630
254.2
RHH5287_R3659
289.6
Non-Vd2 gdTCR nTPM: 290.1
Samples: 4
Max nTPM: 307.1
Min nTPM: 269.8
RHH5235_R3607
307.1
RHH5264_R3636
302.1
RHH5207_R3578
281.5
RHH5299_R3665
269.8
T-reg nTPM: 324.3
Samples: 4
Max nTPM: 396.1
Min nTPM: 274.4
RHH5301_R3667
321.3
RHH5237_R3609
396.1
RHH5266_R3638
305.2
RHH5209_R3580
274.4
Terminal effector memory CD4 T-cell nTPM: 350.2
Samples: 2
Max nTPM: 362.2
Min nTPM: 338.2
RHH5243_R3615
362.2
RHH5272_R3644
338.2
Terminal effector memory CD8 T-cell nTPM: 320.8
Samples: 4
Max nTPM: 361.7
Min nTPM: 249.8
RHH5232_R3604
338.8
RHH5204_R3575
249.8
RHH5261_R3633
361.7
RHH5296_R3662
333.0
Vd2 gdTCR nTPM: 280.2
Samples: 4
Max nTPM: 304.4
Min nTPM: 258.5
RHH5234_R3606
295.1
RHH5206_R3577
262.6
RHH5263_R3635
304.4
RHH5298_R3664
258.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.