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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
56.5
nTPM
Monaco:
167.4
nTPM
Schmiedel:
10.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.5
HPA sample
nTPM
gdT-cell nTPM: 51.5
Samples: 6
Max nTPM: 64.0
Min nTPM: 38.5
P10809_1007
64.0
P10809_1022
49.2
P10809_1041
53.3
P10809_1060
38.5
P10809_1077
43.9
P10809_1098
60.3
MAIT T-cell nTPM: 53.4
Samples: 6
Max nTPM: 82.6
Min nTPM: 44.4
P10809_1006
44.4
P10809_1024
45.3
P10809_1043
54.1
P10809_1062
47.7
P10809_1083
46.3
P10809_1097
82.6
Memory CD4 T-cell nTPM: 46.9
Samples: 6
Max nTPM: 55.0
Min nTPM: 43.2
P10809_1014
55.0
P10809_1026
47.0
P10809_1045
43.2
P10809_1064
46.5
P10809_1086
44.9
P10809_1113
44.8
Memory CD8 T-cell nTPM: 56.5
Samples: 5
Max nTPM: 62.0
Min nTPM: 46.9
P10809_1012
57.8
P10809_1027
55.1
P10809_1046
62.0
P10809_1065
46.9
P10809_1111
60.6
Naive CD4 T-cell nTPM: 52.3
Samples: 6
Max nTPM: 85.9
Min nTPM: 41.2
P10809_1015
42.4
P10809_1030
41.2
P10809_1049
43.4
P10809_1068
46.8
P10809_1085
85.9
P10809_1112
54.0
Naive CD8 T-cell nTPM: 47.2
Samples: 6
Max nTPM: 52.1
Min nTPM: 40.2
P10809_1016
51.3
P10809_1031
52.1
P10809_1050
40.2
P10809_1069
43.4
P10809_1087
49.9
P10809_1110
46.3
T-reg nTPM: 50.9
Samples: 6
Max nTPM: 67.1
Min nTPM: 35.4
P10809_1018
67.1
P10809_1037
41.2
P10809_1056
50.2
P10809_1075
35.4
P10809_1094
63.6
P10809_1106
47.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
167.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 111.2
Samples: 4
Max nTPM: 204.4
Min nTPM: 51.0
RHH5202_R3573
115.9
RHH5230_R3602
73.6
RHH5259_R3631
51.0
RHH5288_R3660
204.4
Effector memory CD8 T-cell nTPM: 91.7
Samples: 4
Max nTPM: 123.2
Min nTPM: 58.4
RHH5203_R3574
102.3
RHH5231_R3603
123.2
RHH5260_R3632
82.7
RHH5289_R3661
58.4
MAIT T-cell nTPM: 138.1
Samples: 4
Max nTPM: 210.0
Min nTPM: 76.3
RHH5233_R3605
171.8
RHH5205_R3576
76.3
RHH5262_R3634
94.4
RHH5297_R3663
210.0
Memory CD4 T-cell TFH nTPM: 149.9
Samples: 4
Max nTPM: 255.7
Min nTPM: 87.8
RHH5300_R3666
255.7
RHH5236_R3608
126.1
RHH5265_R3637
87.8
RHH5208_R3579
130.0
Memory CD4 T-cell Th1 nTPM: 115.2
Samples: 4
Max nTPM: 195.6
Min nTPM: 62.9
RHH5210_R3581
133.5
RHH5302_R3668
195.6
RHH5238_R3610
62.9
RHH5267_R3639
68.6
Memory CD4 T-cell Th1/Th17 nTPM: 135.6
Samples: 4
Max nTPM: 237.5
Min nTPM: 68.3
RHH5303_R3669
237.5
RHH5211_R3582
142.5
RHH5239_R3611
68.3
RHH5268_R3640
94.1
Memory CD4 T-cell Th17 nTPM: 96.5
Samples: 4
Max nTPM: 134.1
Min nTPM: 71.5
RHH5304_R3670
105.6
RHH5212_R3583
134.1
RHH5240_R3612
74.8
RHH5269_R3641
71.5
Memory CD4 T-cell Th2 nTPM: 98.9
Samples: 4
Max nTPM: 116.5
Min nTPM: 78.3
RHH5305_R3671
116.5
RHH5213_R3584
78.3
RHH5241_R3613
113.8
RHH5270_R3642
87.0
Naive CD4 T-cell nTPM: 91.8
Samples: 4
Max nTPM: 117.7
Min nTPM: 57.7
RHH5306_R3672
110.2
RHH5214_R3585
117.7
RHH5242_R3614
81.7
RHH5271_R3643
57.7
Naive CD8 T-cell nTPM: 70.9
Samples: 4
Max nTPM: 88.1
Min nTPM: 50.0
RHH5201_R3572
82.9
RHH5229_R3601
50.0
RHH5258_R3630
88.1
RHH5287_R3659
62.6
Non-Vd2 gdTCR nTPM: 139.9
Samples: 4
Max nTPM: 222.3
Min nTPM: 57.9
RHH5235_R3607
57.9
RHH5264_R3636
163.0
RHH5207_R3578
116.4
RHH5299_R3665
222.3
T-reg nTPM: 114.3
Samples: 4
Max nTPM: 199.8
Min nTPM: 63.9
RHH5301_R3667
199.8
RHH5237_R3609
112.1
RHH5266_R3638
63.9
RHH5209_R3580
81.4
Terminal effector memory CD4 T-cell nTPM: 100.2
Samples: 2
Max nTPM: 135.8
Min nTPM: 64.5
RHH5243_R3615
64.5
RHH5272_R3644
135.8
Terminal effector memory CD8 T-cell nTPM: 150.3
Samples: 4
Max nTPM: 238.0
Min nTPM: 84.7
RHH5232_R3604
126.2
RHH5204_R3575
152.2
RHH5261_R3633
84.7
RHH5296_R3662
238.0
Vd2 gdTCR nTPM: 167.4
Samples: 4
Max nTPM: 271.3
Min nTPM: 92.9
RHH5234_R3606
145.7
RHH5206_R3577
159.6
RHH5263_R3635
92.9
RHH5298_R3664
271.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
