HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:186.8 nTPM
HPA Brain:241.9 nTPM
GTEx:186.8 nTPM
FANTOM5:167.7 Scaled Tags Per Million
Pig:43.9 nTPM
Mouse:155.6 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041213
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 241.9
Sample id Sample description nTPM
Hippocampus
nTPM: 230.7
1898 Male, age 80, left hemisphere 294.7
2529 Female, age 94, left hemisphere 262.5
1855 Male, age 76, left hemisphere 213.6
2148 Female, age 91, left hemisphere 212.3
2621 Female, age 67, right hemisphere 204.8
1911 Female, age 85, right hemisphere 196.1
Dentate gyrus
nTPM: 216.8
2530 Female, age 94, left hemisphere 239.3
1927 Female, age 91, both hemispheres 237.5
2010 Male, age 76, both hemispheres 224.3
2528 Male, age 74, both hemispheres 220.4
2246 Female, age 85, both hemispheres 199.9
2531 Female, age 67, both hemispheres 179.7
Entorhinal gyrus
nTPM: 220.0
2764 Male, age 80, right hemisphere 266.4
2117 Female, age 91, right hemisphere 234.9
1787 Male, age 76, left hemisphere 232.3
1938 Female, age 85, left hemisphere 224.5
2686 Male, age 75, right hemisphere 181.7
2613 Female, age 94, left hemisphere 180.4
Hippocampus, CA1
nTPM: 241.9
2749 Male, age 80, left hemisphere 337.6
2527 Male, age 74, both hemispheres 238.9
2082 Female, age 91, right hemisphere 211.6
1873 Female, age 85, both hemispheres 211.5
2045 Male, age 76, both hemispheres 210.1
Hippocampus, CA2
nTPM: 227.9
1963 Male, age 80, left hemisphere 281.4
2249 Male, age 74, both hemispheres 247.0
1892 Male, age 76, both hemispheres 238.8
2437 Female, age 94, left hemisphere 210.9
2113 Female, age 91, right hemisphere 203.9
1940 Female, age 85, left hemisphere 185.2
Hippocampus, CA3
nTPM: 223.0
2137 Male, age 80, left hemisphere 266.7
2436 Male, age 74, both hemispheres 265.2
1867 Male, age 76, both hemispheres 230.5
2620 Female, age 94, left hemisphere 208.3
1891 Female, age 85, both hemispheres 198.4
2861 Female, age 67, both hemispheres 169.1
Parahippocampal cortex
nTPM: 206.1
1850 Male, age 80, both hemispheres 237.0
1990 Female, age 91, right hemisphere 234.6
1933 Female, age 85, both hemispheres 227.1
2245 Female, age 91, both hemispheres 218.7
2018 Male, age 76, both hemispheres 216.8
2250 Female, age 67, right hemisphere 212.9
2532 Female, age 72, left hemisphere 196.0
2692 Male, age 74, both hemispheres 187.8
2622 Female, age 67, right hemisphere 166.3
2693 Female, age 94, both hemispheres 163.8
Perirhinal gyrus
nTPM: 239.1
1847 Female, age 91, left hemisphere 285.6
1794 Male, age 80, right hemisphere 276.1
1841 Female, age 85, right hemisphere 234.6
2848 Male, age 76, right hemisphere 211.6
2521 Female, age 94, right hemisphere 187.5
Subiculum
nTPM: 207.6
1977 Female, age 85, both hemispheres 233.5
1901 Male, age 80, both hemispheres 232.9
2729 Female, age 91, right hemisphere 218.4
2619 Male, age 74, both hemispheres 205.9
2042 Male, age 76, both hemispheres 193.8
2438 Female, age 94, left hemisphere 160.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 186.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 186.8
Samples: 197

Max nTPM: 502.9
Min nTPM: 46.7
Std nTPM: 61.6
Median nTPM: 177.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 502.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 430.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 392.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 385.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 367.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 362.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 359.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 344.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 315.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 302.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 292.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 167.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 167.7
FF:10169-103B7 60 years, female 181.7
FF:10153-102I9 76 years, female 153.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.9
Pig sample Sample description nTPM
Subiculum
nTPM: 35.5
Samples: 4

Max nTPM: 47.5
Min nTPM: 28.4
Sample A Female 47.5
Sample B Female 34.4
Sample C Male 31.6
Sample D Male 28.4
Dorsal hippocampus
nTPM: 43.9
Samples: 4

Max nTPM: 56.7
Min nTPM: 33.4
Sample A Female 56.7
Sample B Female 40.6
Sample C Male 44.8
Sample D Male 33.4
Entorhinal cortex
nTPM: 41.0
Samples: 4

Max nTPM: 47.9
Min nTPM: 33.0
Sample A Female 41.9
Sample B Female 47.9
Sample C Male 41.3
Sample D Male 33.0
Ventral hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 49.1
Min nTPM: 30.7
Sample A Female 44.6
Sample B Female 30.7
Sample C Male 49.1
Sample D Male 39.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 155.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 140.7
Samples: 4

Max nTPM: 143.9
Min nTPM: 137.2
Sample A Male 139.2
Sample B Male 142.4
Sample C Female 143.9
Sample D Female 137.2
Hippocampal formation
nTPM: 155.6
Samples: 4

Max nTPM: 166.6
Min nTPM: 144.6
Sample A Male 155.8
Sample B Male 144.6
Sample C Female 155.5
Sample D Female 166.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
69838573 Antisense, RP_050310_01_F12, Mouse strain C57BL/6J (56 days, male) 13.7

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