HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:27.0 nTPM
HPA Brain:68.4 nTPM
GTEx:27.0 nTPM
FANTOM5:90.2 Scaled Tags Per Million
Pig:55.7 nTPM
Mouse:221.8 nTPM
Allen mouse:17.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013758
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.4
Sample id Sample description nTPM
Hippocampus
nTPM: 51.1
1898 Male, age 80, left hemisphere 66.8
2621 Female, age 67, right hemisphere 53.6
2529 Female, age 94, left hemisphere 50.4
2148 Female, age 91, left hemisphere 45.7
1911 Female, age 85, right hemisphere 45.3
1855 Male, age 76, left hemisphere 44.6
Dentate gyrus
nTPM: 54.4
1927 Female, age 91, both hemispheres 66.7
2010 Male, age 76, both hemispheres 57.2
2528 Male, age 74, both hemispheres 56.2
2246 Female, age 85, both hemispheres 53.1
2530 Female, age 94, left hemisphere 47.3
2531 Female, age 67, both hemispheres 45.9
Entorhinal gyrus
nTPM: 53.8
2764 Male, age 80, right hemisphere 62.4
1938 Female, age 85, left hemisphere 61.3
2613 Female, age 94, left hemisphere 54.2
1787 Male, age 76, left hemisphere 52.1
2117 Female, age 91, right hemisphere 49.5
2686 Male, age 75, right hemisphere 43.3
Hippocampus, CA1
nTPM: 58.7
2749 Male, age 80, left hemisphere 75.8
1873 Female, age 85, both hemispheres 57.7
2527 Male, age 74, both hemispheres 56.3
2082 Female, age 91, right hemisphere 54.0
2045 Male, age 76, both hemispheres 49.7
Hippocampus, CA2
nTPM: 55.9
2249 Male, age 74, both hemispheres 63.7
1892 Male, age 76, both hemispheres 62.7
1963 Male, age 80, left hemisphere 58.4
2113 Female, age 91, right hemisphere 52.3
2437 Female, age 94, left hemisphere 49.5
1940 Female, age 85, left hemisphere 49.1
Hippocampus, CA3
nTPM: 51.6
2620 Female, age 94, left hemisphere 58.8
2436 Male, age 74, both hemispheres 56.0
2137 Male, age 80, left hemisphere 54.4
1867 Male, age 76, both hemispheres 52.4
1891 Female, age 85, both hemispheres 50.0
2861 Female, age 67, both hemispheres 38.1
Parahippocampal cortex
nTPM: 56.5
1850 Male, age 80, both hemispheres 69.1
1933 Female, age 85, both hemispheres 68.5
2250 Female, age 67, right hemisphere 61.0
2245 Female, age 91, both hemispheres 60.7
1990 Female, age 91, right hemisphere 56.1
2532 Female, age 72, left hemisphere 53.1
2693 Female, age 94, both hemispheres 53.1
2018 Male, age 76, both hemispheres 52.9
2622 Female, age 67, right hemisphere 47.3
2692 Male, age 74, both hemispheres 43.6
Perirhinal gyrus
nTPM: 68.4
1847 Female, age 91, left hemisphere 76.7
1841 Female, age 85, right hemisphere 75.2
1794 Male, age 80, right hemisphere 68.6
2521 Female, age 94, right hemisphere 63.8
2848 Male, age 76, right hemisphere 57.6
Subiculum
nTPM: 47.7
1977 Female, age 85, both hemispheres 57.7
1901 Male, age 80, both hemispheres 53.9
2729 Female, age 91, right hemisphere 47.5
2619 Male, age 74, both hemispheres 45.3
2042 Male, age 76, both hemispheres 43.7
2438 Female, age 94, left hemisphere 37.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.0
Samples: 197

Max nTPM: 72.7
Min nTPM: 11.6
Std nTPM: 8.9
Median nTPM: 25.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 72.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 51.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 50.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 49.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 46.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 46.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 44.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 44.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 43.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 42.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.2
FF:10169-103B7 60 years, female 113.2
FF:10153-102I9 76 years, female 67.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.7
Pig sample Sample description nTPM
Subiculum
nTPM: 54.6
Samples: 4

Max nTPM: 63.9
Min nTPM: 49.7
Sample A Female 63.9
Sample B Female 52.0
Sample C Male 49.7
Sample D Male 52.7
Dorsal hippocampus
nTPM: 53.0
Samples: 4

Max nTPM: 58.7
Min nTPM: 45.8
Sample A Female 58.7
Sample B Female 57.4
Sample C Male 45.8
Sample D Male 50.0
Entorhinal cortex
nTPM: 55.7
Samples: 4

Max nTPM: 61.5
Min nTPM: 48.6
Sample A Female 55.7
Sample B Female 61.5
Sample C Male 56.8
Sample D Male 48.6
Ventral hippocampus
nTPM: 47.6
Samples: 4

Max nTPM: 53.8
Min nTPM: 41.8
Sample A Female 49.5
Sample B Female 41.8
Sample C Male 45.1
Sample D Male 53.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 221.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 182.9
Samples: 4

Max nTPM: 189.8
Min nTPM: 176.4
Sample A Male 176.4
Sample B Male 178.5
Sample C Female 189.8
Sample D Female 186.8
Hippocampal formation
nTPM: 221.9
Samples: 4

Max nTPM: 238.9
Min nTPM: 206.0
Sample A Male 221.8
Sample B Male 220.7
Sample C Female 238.9
Sample D Female 206.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.5
71232592 Antisense, RP_050412_01_F01, Mouse strain C57BL/6J (56 days, male) 17.5

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