HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:51.7 nTPM
HPA Brain:158.7 nTPM
GTEx:51.7 nTPM
FANTOM5:105.1 Scaled Tags Per Million
Pig:64.6 nTPM
Mouse:69.0 nTPM
Allen mouse:11.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017168
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 158.7
Sample id Sample description nTPM
Hippocampus
nTPM: 158.7
2621 Female, age 67, right hemisphere 197.0
1855 Male, age 76, left hemisphere 165.2
2148 Female, age 91, left hemisphere 155.3
2529 Female, age 94, left hemisphere 149.1
1898 Male, age 80, left hemisphere 146.8
1911 Female, age 85, right hemisphere 139.1
Dentate gyrus
nTPM: 136.8
1927 Female, age 91, both hemispheres 157.4
2530 Female, age 94, left hemisphere 152.4
2531 Female, age 67, both hemispheres 150.1
2010 Male, age 76, both hemispheres 140.4
2246 Female, age 85, both hemispheres 114.5
2528 Male, age 74, both hemispheres 106.0
Entorhinal gyrus
nTPM: 123.0
2613 Female, age 94, left hemisphere 156.5
2764 Male, age 80, right hemisphere 134.5
2686 Male, age 75, right hemisphere 131.5
1938 Female, age 85, left hemisphere 112.2
1787 Male, age 76, left hemisphere 111.7
2117 Female, age 91, right hemisphere 91.6
Hippocampus, CA1
nTPM: 151.8
2749 Male, age 80, left hemisphere 240.4
2527 Male, age 74, both hemispheres 161.5
1873 Female, age 85, both hemispheres 135.4
2082 Female, age 91, right hemisphere 119.7
2045 Male, age 76, both hemispheres 102.1
Hippocampus, CA2
nTPM: 136.7
1963 Male, age 80, left hemisphere 169.4
1892 Male, age 76, both hemispheres 144.3
2113 Female, age 91, right hemisphere 136.9
2437 Female, age 94, left hemisphere 131.8
2249 Male, age 74, both hemispheres 120.1
1940 Female, age 85, left hemisphere 117.9
Hippocampus, CA3
nTPM: 157.2
2861 Female, age 67, both hemispheres 219.9
2137 Male, age 80, left hemisphere 215.7
2620 Female, age 94, left hemisphere 161.6
1867 Male, age 76, both hemispheres 136.4
2436 Male, age 74, both hemispheres 119.6
1891 Female, age 85, both hemispheres 89.8
Parahippocampal cortex
nTPM: 135.2
2245 Female, age 91, both hemispheres 193.8
2622 Female, age 67, right hemisphere 181.2
2250 Female, age 67, right hemisphere 132.3
2532 Female, age 72, left hemisphere 130.5
2693 Female, age 94, both hemispheres 128.3
2018 Male, age 76, both hemispheres 125.9
1933 Female, age 85, both hemispheres 116.8
1850 Male, age 80, both hemispheres 116.3
2692 Male, age 74, both hemispheres 114.7
1990 Female, age 91, right hemisphere 112.7
Perirhinal gyrus
nTPM: 126.4
2521 Female, age 94, right hemisphere 151.7
1847 Female, age 91, left hemisphere 138.7
1794 Male, age 80, right hemisphere 135.1
1841 Female, age 85, right hemisphere 108.2
2848 Male, age 76, right hemisphere 98.1
Subiculum
nTPM: 113.3
1901 Male, age 80, both hemispheres 126.9
2042 Male, age 76, both hemispheres 122.6
2619 Male, age 74, both hemispheres 114.8
2438 Female, age 94, left hemisphere 112.4
2729 Female, age 91, right hemisphere 101.9
1977 Female, age 85, both hemispheres 101.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.7
Samples: 197

Max nTPM: 221.3
Min nTPM: 11.9
Std nTPM: 28.6
Median nTPM: 47.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 221.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 154.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 120.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 112.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 107.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 104.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 104.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 101.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 101.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 101.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 100.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.1
FF:10169-103B7 60 years, female 111.1
FF:10153-102I9 76 years, female 99.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.6
Pig sample Sample description nTPM
Subiculum
nTPM: 42.1
Samples: 4

Max nTPM: 56.6
Min nTPM: 34.8
Sample A Female 56.6
Sample B Female 34.8
Sample C Male 41.4
Sample D Male 35.7
Dorsal hippocampus
nTPM: 64.5
Samples: 4

Max nTPM: 81.6
Min nTPM: 41.6
Sample A Female 81.6
Sample B Female 77.3
Sample C Male 41.6
Sample D Male 57.6
Entorhinal cortex
nTPM: 57.4
Samples: 4

Max nTPM: 73.3
Min nTPM: 47.4
Sample A Female 73.3
Sample B Female 47.4
Sample C Male 55.5
Sample D Male 53.2
Ventral hippocampus
nTPM: 58.7
Samples: 4

Max nTPM: 72.5
Min nTPM: 35.1
Sample A Female 63.1
Sample B Female 35.1
Sample C Male 64.0
Sample D Male 72.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 69.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 69.0
Samples: 4

Max nTPM: 75.5
Min nTPM: 63.3
Sample A Male 70.0
Sample B Male 75.5
Sample C Female 63.3
Sample D Female 67.2
Hippocampal formation
nTPM: 56.3
Samples: 4

Max nTPM: 64.9
Min nTPM: 52.5
Sample A Male 52.5
Sample B Male 52.9
Sample C Female 64.9
Sample D Female 54.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.0
71836809 Antisense, RP_051017_02_B02, Mouse strain C57BL/6J (56 days, male) 15.5
68193047 Antisense, RP_040825_02_H11, Mouse strain C57BL/6J (56 days, male) 6.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org