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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
179.6
nTPM
Monaco:
148.8
nTPM
Schmiedel:
45.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
179.6
HPA sample
nTPM
gdT-cell nTPM: 71.3
Samples: 6
Max nTPM: 85.6
Min nTPM: 64.7
P10809_1007
65.1
P10809_1022
71.8
P10809_1041
64.7
P10809_1060
85.6
P10809_1077
75.0
P10809_1098
65.7
MAIT T-cell nTPM: 94.9
Samples: 6
Max nTPM: 136.0
Min nTPM: 72.0
P10809_1006
84.2
P10809_1024
114.7
P10809_1043
84.1
P10809_1062
136.0
P10809_1083
78.5
P10809_1097
72.0
Memory CD4 T-cell nTPM: 115.5
Samples: 6
Max nTPM: 145.6
Min nTPM: 88.9
P10809_1014
110.7
P10809_1026
136.0
P10809_1045
98.8
P10809_1064
145.6
P10809_1086
88.9
P10809_1113
112.7
Memory CD8 T-cell nTPM: 92.0
Samples: 5
Max nTPM: 117.7
Min nTPM: 77.1
P10809_1012
77.1
P10809_1027
117.7
P10809_1046
82.5
P10809_1065
92.4
P10809_1111
90.1
Naive CD4 T-cell nTPM: 122.2
Samples: 6
Max nTPM: 183.4
Min nTPM: 75.2
P10809_1015
132.3
P10809_1030
129.4
P10809_1049
75.2
P10809_1068
183.4
P10809_1085
98.6
P10809_1112
114.1
Naive CD8 T-cell nTPM: 99.0
Samples: 6
Max nTPM: 132.7
Min nTPM: 75.1
P10809_1016
132.2
P10809_1031
75.1
P10809_1050
79.5
P10809_1069
132.7
P10809_1087
84.6
P10809_1110
89.6
T-reg nTPM: 179.6
Samples: 6
Max nTPM: 244.5
Min nTPM: 132.2
P10809_1018
136.8
P10809_1037
226.6
P10809_1056
132.2
P10809_1075
244.5
P10809_1094
188.9
P10809_1106
148.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
148.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 116.9
Samples: 4
Max nTPM: 144.2
Min nTPM: 101.2
RHH5202_R3573
101.2
RHH5230_R3602
103.6
RHH5259_R3631
144.2
RHH5288_R3660
118.7
Effector memory CD8 T-cell nTPM: 92.1
Samples: 4
Max nTPM: 115.7
Min nTPM: 70.7
RHH5203_R3574
115.7
RHH5231_R3603
82.1
RHH5260_R3632
99.9
RHH5289_R3661
70.7
MAIT T-cell nTPM: 125.7
Samples: 4
Max nTPM: 139.2
Min nTPM: 117.1
RHH5233_R3605
122.3
RHH5205_R3576
117.1
RHH5262_R3634
139.2
RHH5297_R3663
124.2
Memory CD4 T-cell TFH nTPM: 125.6
Samples: 4
Max nTPM: 145.2
Min nTPM: 110.6
RHH5300_R3666
145.2
RHH5236_R3608
110.6
RHH5265_R3637
118.7
RHH5208_R3579
128.0
Memory CD4 T-cell Th1 nTPM: 148.7
Samples: 4
Max nTPM: 202.4
Min nTPM: 118.4
RHH5210_R3581
118.4
RHH5302_R3668
202.4
RHH5238_R3610
123.8
RHH5267_R3639
150.3
Memory CD4 T-cell Th1/Th17 nTPM: 120.2
Samples: 4
Max nTPM: 163.7
Min nTPM: 88.5
RHH5303_R3669
130.9
RHH5211_R3582
97.6
RHH5239_R3611
88.5
RHH5268_R3640
163.7
Memory CD4 T-cell Th17 nTPM: 123.5
Samples: 4
Max nTPM: 150.4
Min nTPM: 89.9
RHH5304_R3670
150.4
RHH5212_R3583
117.4
RHH5240_R3612
89.9
RHH5269_R3641
136.3
Memory CD4 T-cell Th2 nTPM: 145.4
Samples: 4
Max nTPM: 163.6
Min nTPM: 126.2
RHH5305_R3671
163.6
RHH5213_R3584
135.2
RHH5241_R3613
126.2
RHH5270_R3642
156.4
Naive CD4 T-cell nTPM: 138.2
Samples: 4
Max nTPM: 165.5
Min nTPM: 104.9
RHH5306_R3672
165.5
RHH5214_R3585
154.0
RHH5242_R3614
104.9
RHH5271_R3643
128.4
Naive CD8 T-cell nTPM: 102.3
Samples: 4
Max nTPM: 116.5
Min nTPM: 92.9
RHH5201_R3572
95.8
RHH5229_R3601
92.9
RHH5258_R3630
116.5
RHH5287_R3659
104.1
Non-Vd2 gdTCR nTPM: 105.7
Samples: 4
Max nTPM: 136.5
Min nTPM: 81.4
RHH5235_R3607
92.9
RHH5264_R3636
81.4
RHH5207_R3578
111.9
RHH5299_R3665
136.5
T-reg nTPM: 131.0
Samples: 4
Max nTPM: 158.3
Min nTPM: 81.0
RHH5301_R3667
158.3
RHH5237_R3609
81.0
RHH5266_R3638
155.1
RHH5209_R3580
129.5
Terminal effector memory CD4 T-cell nTPM: 101.4
Samples: 2
Max nTPM: 102.7
Min nTPM: 100.1
RHH5243_R3615
100.1
RHH5272_R3644
102.7
Terminal effector memory CD8 T-cell nTPM: 127.6
Samples: 4
Max nTPM: 219.9
Min nTPM: 83.9
RHH5232_R3604
83.9
RHH5204_R3575
219.9
RHH5261_R3633
108.7
RHH5296_R3662
97.9
Vd2 gdTCR nTPM: 134.7
Samples: 4
Max nTPM: 171.0
Min nTPM: 105.2
RHH5234_R3606
119.0
RHH5206_R3577
171.0
RHH5263_R3635
105.2
RHH5298_R3664
143.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
