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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
77.2
nTPM
Monaco:
117.4
nTPM
Schmiedel:
1346.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.2
HPA sample
nTPM
gdT-cell nTPM: 49.4
Samples: 6
Max nTPM: 65.9
Min nTPM: 34.5
P10809_1007
35.8
P10809_1022
65.5
P10809_1041
65.9
P10809_1060
34.5
P10809_1077
57.6
P10809_1098
37.0
MAIT T-cell nTPM: 25.6
Samples: 6
Max nTPM: 32.0
Min nTPM: 19.6
P10809_1006
25.8
P10809_1024
24.6
P10809_1043
26.4
P10809_1062
32.0
P10809_1083
25.1
P10809_1097
19.6
Memory CD4 T-cell nTPM: 32.9
Samples: 6
Max nTPM: 51.4
Min nTPM: 23.8
P10809_1014
28.3
P10809_1026
27.8
P10809_1045
31.0
P10809_1064
51.4
P10809_1086
35.2
P10809_1113
23.8
Memory CD8 T-cell nTPM: 41.9
Samples: 5
Max nTPM: 50.7
Min nTPM: 33.4
P10809_1012
33.4
P10809_1027
37.0
P10809_1046
50.3
P10809_1065
50.7
P10809_1111
37.9
Naive CD4 T-cell nTPM: 32.7
Samples: 6
Max nTPM: 47.2
Min nTPM: 23.7
P10809_1015
23.7
P10809_1030
31.8
P10809_1049
30.7
P10809_1068
31.7
P10809_1085
31.3
P10809_1112
47.2
Naive CD8 T-cell nTPM: 36.8
Samples: 6
Max nTPM: 56.6
Min nTPM: 20.1
P10809_1016
20.1
P10809_1031
29.0
P10809_1050
36.2
P10809_1069
56.6
P10809_1087
38.2
P10809_1110
40.7
T-reg nTPM: 77.2
Samples: 6
Max nTPM: 104.5
Min nTPM: 32.3
P10809_1018
66.7
P10809_1037
80.2
P10809_1056
104.5
P10809_1075
103.5
P10809_1094
32.3
P10809_1106
76.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
117.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 75.8
Samples: 4
Max nTPM: 97.5
Min nTPM: 39.5
RHH5202_R3573
39.5
RHH5230_R3602
97.5
RHH5259_R3631
84.4
RHH5288_R3660
81.8
Effector memory CD8 T-cell nTPM: 117.4
Samples: 4
Max nTPM: 145.8
Min nTPM: 69.1
RHH5203_R3574
145.8
RHH5231_R3603
129.0
RHH5260_R3632
125.5
RHH5289_R3661
69.1
MAIT T-cell nTPM: 61.1
Samples: 4
Max nTPM: 78.1
Min nTPM: 48.7
RHH5233_R3605
48.7
RHH5205_R3576
78.1
RHH5262_R3634
57.8
RHH5297_R3663
59.6
Memory CD4 T-cell TFH nTPM: 70.1
Samples: 4
Max nTPM: 81.3
Min nTPM: 41.2
RHH5300_R3666
78.5
RHH5236_R3608
79.2
RHH5265_R3637
81.3
RHH5208_R3579
41.2
Memory CD4 T-cell Th1 nTPM: 69.1
Samples: 4
Max nTPM: 87.9
Min nTPM: 47.5
RHH5210_R3581
47.5
RHH5302_R3668
67.0
RHH5238_R3610
73.9
RHH5267_R3639
87.9
Memory CD4 T-cell Th1/Th17 nTPM: 62.8
Samples: 4
Max nTPM: 75.4
Min nTPM: 45.5
RHH5303_R3669
45.5
RHH5211_R3582
69.9
RHH5239_R3611
75.4
RHH5268_R3640
60.4
Memory CD4 T-cell Th17 nTPM: 71.5
Samples: 4
Max nTPM: 92.4
Min nTPM: 54.0
RHH5304_R3670
60.7
RHH5212_R3583
78.8
RHH5240_R3612
92.4
RHH5269_R3641
54.0
Memory CD4 T-cell Th2 nTPM: 83.9
Samples: 4
Max nTPM: 85.9
Min nTPM: 82.7
RHH5305_R3671
85.9
RHH5213_R3584
82.7
RHH5241_R3613
83.1
RHH5270_R3642
83.9
Naive CD4 T-cell nTPM: 61.4
Samples: 4
Max nTPM: 73.6
Min nTPM: 54.7
RHH5306_R3672
58.4
RHH5214_R3585
59.0
RHH5242_R3614
73.6
RHH5271_R3643
54.7
Naive CD8 T-cell nTPM: 48.8
Samples: 4
Max nTPM: 56.6
Min nTPM: 33.9
RHH5201_R3572
33.9
RHH5229_R3601
56.6
RHH5258_R3630
53.8
RHH5287_R3659
50.9
Non-Vd2 gdTCR nTPM: 98.7
Samples: 4
Max nTPM: 109.6
Min nTPM: 92.9
RHH5235_R3607
109.6
RHH5264_R3636
92.9
RHH5207_R3578
93.7
RHH5299_R3665
98.6
T-reg nTPM: 75.7
Samples: 4
Max nTPM: 101.0
Min nTPM: 62.3
RHH5301_R3667
62.3
RHH5237_R3609
101.0
RHH5266_R3638
74.9
RHH5209_R3580
64.4
Terminal effector memory CD4 T-cell nTPM: 94.9
Samples: 2
Max nTPM: 97.0
Min nTPM: 92.7
RHH5243_R3615
92.7
RHH5272_R3644
97.0
Terminal effector memory CD8 T-cell nTPM: 94.9
Samples: 4
Max nTPM: 110.5
Min nTPM: 69.1
RHH5232_R3604
96.3
RHH5204_R3575
103.5
RHH5261_R3633
110.5
RHH5296_R3662
69.1
Vd2 gdTCR nTPM: 81.7
Samples: 4
Max nTPM: 95.4
Min nTPM: 68.0
RHH5234_R3606
69.0
RHH5206_R3577
94.5
RHH5263_R3635
95.4
RHH5298_R3664
68.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
