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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
90.6
nTPM
Monaco:
85.1
nTPM
Schmiedel:
27.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.6
HPA sample
nTPM
gdT-cell nTPM: 78.9
Samples: 6
Max nTPM: 91.2
Min nTPM: 63.3
P10809_1007
63.3
P10809_1022
91.2
P10809_1041
83.9
P10809_1060
83.9
P10809_1077
75.0
P10809_1098
76.0
MAIT T-cell nTPM: 52.8
Samples: 6
Max nTPM: 61.5
Min nTPM: 39.4
P10809_1006
39.4
P10809_1024
60.5
P10809_1043
59.8
P10809_1062
42.3
P10809_1083
53.0
P10809_1097
61.5
Memory CD4 T-cell nTPM: 62.6
Samples: 6
Max nTPM: 77.7
Min nTPM: 34.6
P10809_1014
34.6
P10809_1026
76.2
P10809_1045
60.0
P10809_1064
68.3
P10809_1086
77.7
P10809_1113
58.6
Memory CD8 T-cell nTPM: 69.2
Samples: 5
Max nTPM: 88.7
Min nTPM: 45.8
P10809_1012
45.8
P10809_1027
60.3
P10809_1046
78.5
P10809_1065
88.7
P10809_1111
72.5
Naive CD4 T-cell nTPM: 41.9
Samples: 6
Max nTPM: 58.3
Min nTPM: 22.9
P10809_1015
22.9
P10809_1030
47.0
P10809_1049
58.3
P10809_1068
41.6
P10809_1085
42.9
P10809_1112
38.8
Naive CD8 T-cell nTPM: 62.0
Samples: 6
Max nTPM: 91.1
Min nTPM: 32.9
P10809_1016
32.9
P10809_1031
62.1
P10809_1050
64.8
P10809_1069
76.8
P10809_1087
91.1
P10809_1110
44.3
T-reg nTPM: 90.6
Samples: 6
Max nTPM: 141.5
Min nTPM: 52.3
P10809_1018
52.3
P10809_1037
89.3
P10809_1056
141.5
P10809_1075
68.4
P10809_1094
106.5
P10809_1106
85.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.5
Samples: 4
Max nTPM: 42.6
Min nTPM: 27.2
RHH5202_R3573
42.6
RHH5230_R3602
27.2
RHH5259_R3631
28.2
RHH5288_R3660
40.0
Effector memory CD8 T-cell nTPM: 43.3
Samples: 4
Max nTPM: 50.6
Min nTPM: 31.8
RHH5203_R3574
44.8
RHH5231_R3603
46.1
RHH5260_R3632
50.6
RHH5289_R3661
31.8
MAIT T-cell nTPM: 54.5
Samples: 4
Max nTPM: 85.5
Min nTPM: 36.5
RHH5233_R3605
46.6
RHH5205_R3576
36.5
RHH5262_R3634
49.3
RHH5297_R3663
85.5
Memory CD4 T-cell TFH nTPM: 50.9
Samples: 4
Max nTPM: 66.4
Min nTPM: 39.5
RHH5300_R3666
53.3
RHH5236_R3608
66.4
RHH5265_R3637
39.5
RHH5208_R3579
44.3
Memory CD4 T-cell Th1 nTPM: 42.1
Samples: 4
Max nTPM: 70.7
Min nTPM: 30.1
RHH5210_R3581
34.0
RHH5302_R3668
70.7
RHH5238_R3610
30.1
RHH5267_R3639
33.6
Memory CD4 T-cell Th1/Th17 nTPM: 48.3
Samples: 4
Max nTPM: 92.8
Min nTPM: 25.6
RHH5303_R3669
92.8
RHH5211_R3582
40.2
RHH5239_R3611
25.6
RHH5268_R3640
34.6
Memory CD4 T-cell Th17 nTPM: 36.1
Samples: 4
Max nTPM: 46.6
Min nTPM: 24.1
RHH5304_R3670
46.6
RHH5212_R3583
45.7
RHH5240_R3612
24.1
RHH5269_R3641
28.1
Memory CD4 T-cell Th2 nTPM: 41.8
Samples: 4
Max nTPM: 53.1
Min nTPM: 34.8
RHH5305_R3671
42.6
RHH5213_R3584
36.5
RHH5241_R3613
53.1
RHH5270_R3642
34.8
Naive CD4 T-cell nTPM: 29.4
Samples: 4
Max nTPM: 46.2
Min nTPM: 17.9
RHH5306_R3672
26.5
RHH5214_R3585
46.2
RHH5242_R3614
26.8
RHH5271_R3643
17.9
Naive CD8 T-cell nTPM: 24.0
Samples: 4
Max nTPM: 37.2
Min nTPM: 11.1
RHH5201_R3572
26.9
RHH5229_R3601
11.1
RHH5258_R3630
37.2
RHH5287_R3659
20.6
Non-Vd2 gdTCR nTPM: 67.9
Samples: 4
Max nTPM: 98.4
Min nTPM: 38.6
RHH5235_R3607
38.6
RHH5264_R3636
71.9
RHH5207_R3578
62.6
RHH5299_R3665
98.4
T-reg nTPM: 43.8
Samples: 4
Max nTPM: 54.4
Min nTPM: 32.5
RHH5301_R3667
54.4
RHH5237_R3609
52.0
RHH5266_R3638
36.4
RHH5209_R3580
32.5
Terminal effector memory CD4 T-cell nTPM: 48.3
Samples: 2
Max nTPM: 64.0
Min nTPM: 32.5
RHH5243_R3615
32.5
RHH5272_R3644
64.0
Terminal effector memory CD8 T-cell nTPM: 85.2
Samples: 4
Max nTPM: 121.8
Min nTPM: 52.4
RHH5232_R3604
69.1
RHH5204_R3575
121.8
RHH5261_R3633
52.4
RHH5296_R3662
97.3
Vd2 gdTCR nTPM: 78.9
Samples: 4
Max nTPM: 126.9
Min nTPM: 49.3
RHH5234_R3606
59.3
RHH5206_R3577
126.9
RHH5263_R3635
49.3
RHH5298_R3664
80.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
