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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
124.7
nTPM
Monaco:
191.6
nTPM
Schmiedel:
79.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
124.7
HPA sample
nTPM
gdT-cell nTPM: 80.6
Samples: 6
Max nTPM: 107.6
Min nTPM: 66.1
P10809_1007
85.8
P10809_1022
74.9
P10809_1041
77.9
P10809_1060
71.0
P10809_1077
66.1
P10809_1098
107.6
MAIT T-cell nTPM: 41.0
Samples: 6
Max nTPM: 62.2
Min nTPM: 26.4
P10809_1006
43.6
P10809_1024
26.4
P10809_1043
32.9
P10809_1062
44.4
P10809_1083
62.2
P10809_1097
36.5
Memory CD4 T-cell nTPM: 90.6
Samples: 6
Max nTPM: 112.6
Min nTPM: 75.1
P10809_1014
112.6
P10809_1026
86.8
P10809_1045
75.1
P10809_1064
89.0
P10809_1086
89.7
P10809_1113
90.2
Memory CD8 T-cell nTPM: 124.7
Samples: 5
Max nTPM: 179.3
Min nTPM: 69.1
P10809_1012
179.3
P10809_1027
131.9
P10809_1046
110.0
P10809_1065
69.1
P10809_1111
133.2
Naive CD4 T-cell nTPM: 5.5
Samples: 6
Max nTPM: 18.5
Min nTPM: 1.5
P10809_1015
4.0
P10809_1030
2.3
P10809_1049
3.5
P10809_1068
3.2
P10809_1085
18.5
P10809_1112
1.5
Naive CD8 T-cell nTPM: 51.8
Samples: 6
Max nTPM: 71.8
Min nTPM: 36.8
P10809_1016
71.8
P10809_1031
36.8
P10809_1050
45.2
P10809_1069
50.9
P10809_1087
61.2
P10809_1110
44.6
T-reg nTPM: 89.7
Samples: 6
Max nTPM: 150.4
Min nTPM: 61.8
P10809_1018
150.4
P10809_1037
81.5
P10809_1056
61.8
P10809_1075
64.3
P10809_1094
86.4
P10809_1106
93.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
191.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 168.5
Samples: 4
Max nTPM: 207.7
Min nTPM: 124.6
RHH5202_R3573
183.2
RHH5230_R3602
158.3
RHH5259_R3631
124.6
RHH5288_R3660
207.7
Effector memory CD8 T-cell nTPM: 180.9
Samples: 4
Max nTPM: 217.9
Min nTPM: 119.4
RHH5203_R3574
217.9
RHH5231_R3603
181.6
RHH5260_R3632
119.4
RHH5289_R3661
204.8
MAIT T-cell nTPM: 31.7
Samples: 4
Max nTPM: 40.4
Min nTPM: 25.7
RHH5233_R3605
33.9
RHH5205_R3576
25.7
RHH5262_R3634
26.6
RHH5297_R3663
40.4
Memory CD4 T-cell TFH nTPM: 71.3
Samples: 4
Max nTPM: 85.7
Min nTPM: 50.8
RHH5300_R3666
50.8
RHH5236_R3608
81.3
RHH5265_R3637
85.7
RHH5208_R3579
67.4
Memory CD4 T-cell Th1 nTPM: 191.6
Samples: 4
Max nTPM: 262.9
Min nTPM: 109.2
RHH5210_R3581
109.2
RHH5302_R3668
262.9
RHH5238_R3610
173.9
RHH5267_R3639
220.4
Memory CD4 T-cell Th1/Th17 nTPM: 169.9
Samples: 4
Max nTPM: 231.0
Min nTPM: 90.8
RHH5303_R3669
231.0
RHH5211_R3582
197.6
RHH5239_R3611
90.8
RHH5268_R3640
160.2
Memory CD4 T-cell Th17 nTPM: 15.4
Samples: 4
Max nTPM: 30.3
Min nTPM: 2.2
RHH5304_R3670
30.3
RHH5212_R3583
20.2
RHH5240_R3612
2.2
RHH5269_R3641
8.9
Memory CD4 T-cell Th2 nTPM: 18.0
Samples: 4
Max nTPM: 27.9
Min nTPM: 4.9
RHH5305_R3671
27.9
RHH5213_R3584
4.9
RHH5241_R3613
17.3
RHH5270_R3642
21.7
Naive CD4 T-cell nTPM: 4.9
Samples: 4
Max nTPM: 6.4
Min nTPM: 4.1
RHH5306_R3672
4.4
RHH5214_R3585
4.1
RHH5242_R3614
6.4
RHH5271_R3643
4.6
Naive CD8 T-cell nTPM: 33.1
Samples: 4
Max nTPM: 45.6
Min nTPM: 23.6
RHH5201_R3572
35.1
RHH5229_R3601
28.0
RHH5258_R3630
45.6
RHH5287_R3659
23.6
Non-Vd2 gdTCR nTPM: 60.3
Samples: 4
Max nTPM: 76.0
Min nTPM: 36.8
RHH5235_R3607
76.0
RHH5264_R3636
73.8
RHH5207_R3578
36.8
RHH5299_R3665
54.6
T-reg nTPM: 89.9
Samples: 4
Max nTPM: 116.8
Min nTPM: 54.5
RHH5301_R3667
112.7
RHH5237_R3609
116.8
RHH5266_R3638
75.4
RHH5209_R3580
54.5
Terminal effector memory CD4 T-cell nTPM: 96.9
Samples: 2
Max nTPM: 115.3
Min nTPM: 78.5
RHH5243_R3615
115.3
RHH5272_R3644
78.5
Terminal effector memory CD8 T-cell nTPM: 100.1
Samples: 4
Max nTPM: 121.3
Min nTPM: 46.3
RHH5232_R3604
115.9
RHH5204_R3575
46.3
RHH5261_R3633
116.8
RHH5296_R3662
121.3
Vd2 gdTCR nTPM: 142.5
Samples: 4
Max nTPM: 165.9
Min nTPM: 114.7
RHH5234_R3606
161.3
RHH5206_R3577
128.1
RHH5263_R3635
114.7
RHH5298_R3664
165.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
