HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:23.3 nTPM
HPA Brain:28.7 nTPM
GTEx:23.3 nTPM
FANTOM5:12.8 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:4.4 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000592
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 25.2
2529 Female, age 94, left hemisphere 34.7
2148 Female, age 91, left hemisphere 27.2
1911 Female, age 85, right hemisphere 27.1
1898 Male, age 80, left hemisphere 23.8
2621 Female, age 67, right hemisphere 20.0
1855 Male, age 76, left hemisphere 18.0
Dentate gyrus
nTPM: 21.5
2528 Male, age 74, both hemispheres 32.7
1927 Female, age 91, both hemispheres 24.8
2246 Female, age 85, both hemispheres 21.1
2531 Female, age 67, both hemispheres 19.9
2530 Female, age 94, left hemisphere 16.7
2010 Male, age 76, both hemispheres 13.7
Entorhinal gyrus
nTPM: 28.7
2117 Female, age 91, right hemisphere 35.5
2686 Male, age 75, right hemisphere 30.5
1787 Male, age 76, left hemisphere 29.0
1938 Female, age 85, left hemisphere 28.6
2764 Male, age 80, right hemisphere 25.5
2613 Female, age 94, left hemisphere 22.9
Hippocampus, CA1
nTPM: 20.9
2527 Male, age 74, both hemispheres 29.5
1873 Female, age 85, both hemispheres 23.7
2082 Female, age 91, right hemisphere 21.6
2045 Male, age 76, both hemispheres 17.2
2749 Male, age 80, left hemisphere 12.3
Hippocampus, CA2
nTPM: 20.4
2113 Female, age 91, right hemisphere 25.8
2437 Female, age 94, left hemisphere 23.0
2249 Male, age 74, both hemispheres 21.3
1940 Female, age 85, left hemisphere 19.4
1963 Male, age 80, left hemisphere 18.3
1892 Male, age 76, both hemispheres 14.8
Hippocampus, CA3
nTPM: 22.3
2861 Female, age 67, both hemispheres 32.9
1891 Female, age 85, both hemispheres 25.5
2620 Female, age 94, left hemisphere 20.3
1867 Male, age 76, both hemispheres 20.1
2436 Male, age 74, both hemispheres 19.6
2137 Male, age 80, left hemisphere 15.4
Parahippocampal cortex
nTPM: 24.4
2692 Male, age 74, both hemispheres 37.4
2622 Female, age 67, right hemisphere 26.3
1933 Female, age 85, both hemispheres 26.1
1990 Female, age 91, right hemisphere 24.6
2250 Female, age 67, right hemisphere 24.0
2018 Male, age 76, both hemispheres 22.8
2693 Female, age 94, both hemispheres 21.8
2245 Female, age 91, both hemispheres 21.4
1850 Male, age 80, both hemispheres 20.2
2532 Female, age 72, left hemisphere 19.3
Perirhinal gyrus
nTPM: 21.0
1847 Female, age 91, left hemisphere 23.6
1794 Male, age 80, right hemisphere 22.3
2848 Male, age 76, right hemisphere 20.3
1841 Female, age 85, right hemisphere 19.5
2521 Female, age 94, right hemisphere 19.1
Subiculum
nTPM: 25.5
2619 Male, age 74, both hemispheres 39.5
2729 Female, age 91, right hemisphere 31.6
1977 Female, age 85, both hemispheres 23.7
1901 Male, age 80, both hemispheres 22.1
2042 Male, age 76, both hemispheres 18.3
2438 Female, age 94, left hemisphere 17.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.3
Samples: 197

Max nTPM: 63.4
Min nTPM: 5.1
Std nTPM: 10.3
Median nTPM: 22.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 63.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 57.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 53.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 49.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 48.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 47.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 47.8
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 44.2
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 44.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 43.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 43.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.8
FF:10153-102I9 76 years, female 18.5
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 18.7
Min nTPM: 14.4
Sample A Female 18.3
Sample B Female 14.4
Sample C Male 15.1
Sample D Male 18.7
Dorsal hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 25.0
Min nTPM: 13.7
Sample A Female 17.0
Sample B Female 15.0
Sample C Male 13.7
Sample D Male 25.0
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 22.2
Min nTPM: 15.6
Sample A Female 15.6
Sample B Female 16.9
Sample C Male 22.2
Sample D Male 16.9
Ventral hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 20.6
Min nTPM: 14.2
Sample A Female 16.1
Sample B Female 14.2
Sample C Male 20.6
Sample D Male 19.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.5
Samples: 4

Max nTPM: 3.9
Min nTPM: 3.1
Sample A Male 3.9
Sample B Male 3.7
Sample C Female 3.3
Sample D Female 3.1
Hippocampal formation
nTPM: 4.4
Samples: 4

Max nTPM: 5.0
Min nTPM: 4.0
Sample A Male 4.5
Sample B Male 4.0
Sample C Female 4.0
Sample D Female 5.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
69672007 Antisense, RP_050428_02_G11, Mouse strain C57BL/6J (56 days, male) 4.5

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