HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:140.7 nTPM
HPA Brain:58.6 nTPM
GTEx:140.7 nTPM
FANTOM5:82.9 Scaled Tags Per Million
Pig:14.6 nTPM
Mouse:32.0 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042874
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.6
Sample id Sample description nTPM
Hippocampus
nTPM: 54.2
1898 Male, age 80, left hemisphere 71.9
2529 Female, age 94, left hemisphere 55.4
2621 Female, age 67, right hemisphere 54.9
1855 Male, age 76, left hemisphere 53.3
2148 Female, age 91, left hemisphere 46.1
1911 Female, age 85, right hemisphere 43.7
Dentate gyrus
nTPM: 52.0
2530 Female, age 94, left hemisphere 74.4
2010 Male, age 76, both hemispheres 60.7
1927 Female, age 91, both hemispheres 53.9
2531 Female, age 67, both hemispheres 42.8
2528 Male, age 74, both hemispheres 42.7
2246 Female, age 85, both hemispheres 37.3
Entorhinal gyrus
nTPM: 52.1
2764 Male, age 80, right hemisphere 56.6
2117 Female, age 91, right hemisphere 56.0
2686 Male, age 75, right hemisphere 54.4
1787 Male, age 76, left hemisphere 50.8
1938 Female, age 85, left hemisphere 49.1
2613 Female, age 94, left hemisphere 45.9
Hippocampus, CA1
nTPM: 58.6
2749 Male, age 80, left hemisphere 104.0
2527 Male, age 74, both hemispheres 55.9
1873 Female, age 85, both hemispheres 55.5
2045 Male, age 76, both hemispheres 41.1
2082 Female, age 91, right hemisphere 36.5
Hippocampus, CA2
nTPM: 55.4
1963 Male, age 80, left hemisphere 78.9
1892 Male, age 76, both hemispheres 63.9
2437 Female, age 94, left hemisphere 58.4
2249 Male, age 74, both hemispheres 46.3
1940 Female, age 85, left hemisphere 45.3
2113 Female, age 91, right hemisphere 39.7
Hippocampus, CA3
nTPM: 49.4
2137 Male, age 80, left hemisphere 60.0
1867 Male, age 76, both hemispheres 57.7
2861 Female, age 67, both hemispheres 50.7
1891 Female, age 85, both hemispheres 47.6
2436 Male, age 74, both hemispheres 45.2
2620 Female, age 94, left hemisphere 35.0
Parahippocampal cortex
nTPM: 43.6
1933 Female, age 85, both hemispheres 52.4
2018 Male, age 76, both hemispheres 49.7
2245 Female, age 91, both hemispheres 49.2
2250 Female, age 67, right hemisphere 46.8
1990 Female, age 91, right hemisphere 44.4
2692 Male, age 74, both hemispheres 42.2
1850 Male, age 80, both hemispheres 42.1
2532 Female, age 72, left hemisphere 40.8
2622 Female, age 67, right hemisphere 38.9
2693 Female, age 94, both hemispheres 30.0
Perirhinal gyrus
nTPM: 42.5
1847 Female, age 91, left hemisphere 47.2
1841 Female, age 85, right hemisphere 46.5
1794 Male, age 80, right hemisphere 43.7
2521 Female, age 94, right hemisphere 40.2
2848 Male, age 76, right hemisphere 34.7
Subiculum
nTPM: 49.3
1901 Male, age 80, both hemispheres 61.0
2042 Male, age 76, both hemispheres 54.0
1977 Female, age 85, both hemispheres 51.2
2619 Male, age 74, both hemispheres 47.1
2438 Female, age 94, left hemisphere 47.0
2729 Female, age 91, right hemisphere 35.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 140.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 140.7
Samples: 197

Max nTPM: 304.6
Min nTPM: 56.8
Std nTPM: 42.4
Median nTPM: 132.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 304.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 270.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 260.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 250.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 249.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 248.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 243.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 240.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 236.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 233.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 223.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.9
FF:10169-103B7 60 years, female 89.3
FF:10153-102I9 76 years, female 76.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.6
Pig sample Sample description nTPM
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 19.3
Min nTPM: 10.8
Sample A Female 19.3
Sample B Female 12.7
Sample C Male 12.3
Sample D Male 10.8
Dorsal hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 21.9
Min nTPM: 10.4
Sample A Female 21.9
Sample B Female 13.7
Sample C Male 12.4
Sample D Male 10.4
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 14.0
Min nTPM: 10.8
Sample A Female 13.6
Sample B Female 14.0
Sample C Male 11.8
Sample D Male 10.8
Ventral hippocampus
nTPM: 13.2
Samples: 4

Max nTPM: 16.3
Min nTPM: 10.1
Sample A Female 16.3
Sample B Female 10.1
Sample C Male 14.5
Sample D Male 11.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.0
Samples: 4

Max nTPM: 35.9
Min nTPM: 26.4
Sample A Male 30.5
Sample B Male 35.1
Sample C Female 35.9
Sample D Female 26.4
Hippocampal formation
nTPM: 31.4
Samples: 4

Max nTPM: 34.1
Min nTPM: 28.6
Sample A Male 33.5
Sample B Male 28.6
Sample C Female 29.3
Sample D Female 34.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
69854175 Antisense, RP_050324_04_C07, Mouse strain C57BL/6J (56 days, male) 1.8

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