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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
165.6
nTPM
Monaco:
50.0
nTPM
Schmiedel:
33.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
165.6
HPA sample
nTPM
gdT-cell nTPM: 133.4
Samples: 6
Max nTPM: 179.5
Min nTPM: 90.7
P10809_1007
90.7
P10809_1022
131.0
P10809_1041
179.5
P10809_1060
134.2
P10809_1077
123.5
P10809_1098
141.6
MAIT T-cell nTPM: 123.8
Samples: 6
Max nTPM: 149.1
Min nTPM: 87.8
P10809_1006
87.8
P10809_1024
120.1
P10809_1043
149.1
P10809_1062
130.4
P10809_1083
115.5
P10809_1097
140.1
Memory CD4 T-cell nTPM: 135.6
Samples: 6
Max nTPM: 166.1
Min nTPM: 88.3
P10809_1014
88.3
P10809_1026
161.5
P10809_1045
166.1
P10809_1064
128.3
P10809_1086
119.9
P10809_1113
149.2
Memory CD8 T-cell nTPM: 140.7
Samples: 5
Max nTPM: 179.1
Min nTPM: 91.8
P10809_1012
91.8
P10809_1027
150.1
P10809_1046
164.0
P10809_1065
118.7
P10809_1111
179.1
Naive CD4 T-cell nTPM: 130.5
Samples: 6
Max nTPM: 206.1
Min nTPM: 75.4
P10809_1015
75.4
P10809_1030
147.7
P10809_1049
206.1
P10809_1068
101.1
P10809_1085
115.0
P10809_1112
137.6
Naive CD8 T-cell nTPM: 133.4
Samples: 6
Max nTPM: 167.9
Min nTPM: 88.1
P10809_1016
88.1
P10809_1031
167.9
P10809_1050
140.0
P10809_1069
138.2
P10809_1087
119.5
P10809_1110
146.4
T-reg nTPM: 165.7
Samples: 6
Max nTPM: 218.9
Min nTPM: 96.2
P10809_1018
96.2
P10809_1037
142.7
P10809_1056
190.4
P10809_1075
162.2
P10809_1094
183.5
P10809_1106
218.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
50.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 36.6
Samples: 4
Max nTPM: 57.3
Min nTPM: 27.1
RHH5202_R3573
27.1
RHH5230_R3602
29.0
RHH5259_R3631
32.9
RHH5288_R3660
57.3
Effector memory CD8 T-cell nTPM: 24.3
Samples: 4
Max nTPM: 32.4
Min nTPM: 18.5
RHH5203_R3574
32.4
RHH5231_R3603
18.5
RHH5260_R3632
27.7
RHH5289_R3661
18.6
MAIT T-cell nTPM: 36.7
Samples: 4
Max nTPM: 68.5
Min nTPM: 23.7
RHH5233_R3605
30.3
RHH5205_R3576
24.4
RHH5262_R3634
23.7
RHH5297_R3663
68.5
Memory CD4 T-cell TFH nTPM: 41.8
Samples: 4
Max nTPM: 55.5
Min nTPM: 26.4
RHH5300_R3666
41.9
RHH5236_R3608
55.5
RHH5265_R3637
26.4
RHH5208_R3579
43.5
Memory CD4 T-cell Th1 nTPM: 48.4
Samples: 4
Max nTPM: 78.9
Min nTPM: 27.3
RHH5210_R3581
27.3
RHH5302_R3668
78.9
RHH5238_R3610
51.6
RHH5267_R3639
35.6
Memory CD4 T-cell Th1/Th17 nTPM: 39.2
Samples: 4
Max nTPM: 63.1
Min nTPM: 19.9
RHH5303_R3669
63.1
RHH5211_R3582
42.1
RHH5239_R3611
19.9
RHH5268_R3640
31.8
Memory CD4 T-cell Th17 nTPM: 28.5
Samples: 4
Max nTPM: 47.6
Min nTPM: 14.5
RHH5304_R3670
36.0
RHH5212_R3583
47.6
RHH5240_R3612
15.9
RHH5269_R3641
14.5
Memory CD4 T-cell Th2 nTPM: 33.9
Samples: 4
Max nTPM: 45.7
Min nTPM: 24.7
RHH5305_R3671
45.7
RHH5213_R3584
24.7
RHH5241_R3613
34.4
RHH5270_R3642
30.6
Naive CD4 T-cell nTPM: 30.3
Samples: 4
Max nTPM: 49.5
Min nTPM: 20.9
RHH5306_R3672
49.5
RHH5214_R3585
29.4
RHH5242_R3614
21.2
RHH5271_R3643
20.9
Naive CD8 T-cell nTPM: 25.8
Samples: 4
Max nTPM: 38.8
Min nTPM: 13.4
RHH5201_R3572
13.4
RHH5229_R3601
18.9
RHH5258_R3630
38.8
RHH5287_R3659
31.9
Non-Vd2 gdTCR nTPM: 41.9
Samples: 4
Max nTPM: 66.7
Min nTPM: 25.9
RHH5235_R3607
35.5
RHH5264_R3636
39.6
RHH5207_R3578
25.9
RHH5299_R3665
66.7
T-reg nTPM: 41.2
Samples: 4
Max nTPM: 55.1
Min nTPM: 26.7
RHH5301_R3667
49.1
RHH5237_R3609
55.1
RHH5266_R3638
26.7
RHH5209_R3580
33.9
Terminal effector memory CD4 T-cell nTPM: 29.9
Samples: 2
Max nTPM: 32.3
Min nTPM: 27.5
RHH5243_R3615
27.5
RHH5272_R3644
32.3
Terminal effector memory CD8 T-cell nTPM: 48.5
Samples: 4
Max nTPM: 93.3
Min nTPM: 23.6
RHH5232_R3604
23.6
RHH5204_R3575
93.3
RHH5261_R3633
44.4
RHH5296_R3662
32.8
Vd2 gdTCR nTPM: 50.0
Samples: 4
Max nTPM: 75.3
Min nTPM: 26.5
RHH5234_R3606
26.5
RHH5206_R3577
75.3
RHH5263_R3635
30.5
RHH5298_R3664
67.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
