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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
294.0
nTPM
FANTOM5:
380.5
Scaled Tags Per Million
Pig:
223.6
nTPM
Allen mouse:
0.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
294.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 264.1
2188
Female, age 91, both hemispheres
322.0
2090
Male, age 80, both hemispheres
271.5
2301
Female, age 85, both hemispheres
269.3
1984
Male, age 76, both hemispheres
193.6
Dorsal cochlear nucleus nTPM: 274.6
2802
Male, age 74, right hemisphere
367.3
2187
Female, age 91, both hemispheres
279.7
2378
Male, age 80, both hemispheres
270.0
2370
Male, age 61, both hemispheres
256.2
2058
Male, age 76, both hemispheres
199.6
Dorsal tegmental nucleus nTPM: 247.1
2326
Male, age 74, both hemispheres
311.3
2083
Male, age 80, both hemispheres
242.6
1936
Male, age 76, left hemisphere
234.4
2358
Male, age 61, both hemispheres
199.9
Dorsolateral tegmental area nTPM: 241.2
2654
Male, age 80, both hemispheres
284.3
2751
Female, age 85, both hemispheres
260.0
2360
Male, age 74, both hemispheres
252.8
2337
Male, age 61, both hemispheres
223.9
2141
Male, age 76, both hemispheres
184.9
Kolliker-Fuse nucleus nTPM: 274.7
2793
Female, age 91, left hemisphere
298.9
2315
Male, age 76, right hemisphere
274.4
2163
Male, age 80, both hemispheres
250.8
Lateral lemniscal nuclei nTPM: 241.4
2746
Female, age 85, left hemisphere
259.7
2169
Male, age 76, both hemispheres
244.7
2320
Female, age 91, left hemisphere
239.0
2453
Male, age 74, right hemisphere
237.3
2036
Male, age 80, both hemispheres
226.2
Lateral parabrachial nucleus nTPM: 254.5
2792
Male, age 76, both hemispheres
302.5
2013
Male, age 80, both hemispheres
288.7
2139
Female, age 85, right hemisphere
245.2
2790
Male, age 61, both hemispheres
181.4
Lateral vestibular nucleus nTPM: 249.6
2311
Male, age 80, both hemispheres
253.3
2184
Male, age 76, both hemispheres
245.9
Locus coeruleus nTPM: 220.1
2720
Male, age 74, both hemispheres
268.2
2788
Male, age 74, unknown
245.4
2014
Male, age 55, unknown
236.6
2123
Female, age 91, both hemispheres
217.1
2162
Male, age 80, both hemispheres
207.9
2317
Female, age 72, unknown
187.5
1980
Male, age 76, both hemispheres
177.9
Medial parabrachial nucleus nTPM: 240.6
2170
Female, age 91, both hemispheres
302.1
2854
Male, age 80, both hemispheres
265.7
2786
Male, age 76, both hemispheres
230.5
2463
Female, age 85, right hemisphere
219.6
2156
Male, age 61, both hemispheres
185.2
Medial periolivary nuclei nTPM: 257.7
2081
Male, age 80, both hemispheres
274.9
2458
Female, age 91, both hemispheres
267.0
2063
Male, age 76, both hemispheres
265.0
2171
Female, age 85, both hemispheres
242.9
2791
Male, age 74, right hemisphere
238.6
Motor facial nucleus nTPM: 247.9
2697
Female, age 85, both hemispheres
270.5
2062
Male, age 76, both hemispheres
257.1
2795
Female, age 91, both hemispheres
257.0
2126
Male, age 61, both hemispheres
256.3
2365
Male, age 74, right hemisphere
237.2
2327
Male, age 80, both hemispheres
209.5
Motor trigeminal nucleus nTPM: 240.0
2321
Female, age 91, both hemispheres
275.7
2560
Male, age 74, both hemispheres
252.7
2309
Male, age 76, both hemispheres
230.5
2079
Male, age 80, both hemispheres
224.9
2335
Male, age 61, both hemispheres
216.2
Nuclei of the trapezoid body nTPM: 253.7
2159
Male, age 61, both hemispheres
267.6
1983
Male, age 76, both hemispheres
266.0
2166
Male, age 80, both hemispheres
260.8
2368
Female, age 91, both hemispheres
245.3
2735
Female, age 85, both hemispheres
228.6
Nucleus raphe magnus nTPM: 240.6
2051
Male, age 76, both hemispheres
263.8
2459
Female, age 91, both hemispheres
261.9
2160
Male, age 61, both hemispheres
252.3
2328
Male, age 80, both hemispheres
237.9
2172
Female, age 85, both hemispheres
219.4
2455
Male, age 74, both hemispheres
208.3
Paramedian reticular nucleus nTPM: 265.3
2052
Male, age 76, both hemispheres
309.7
2313
Male, age 61, both hemispheres
262.6
2050
Female, age 85, both hemispheres
255.7
2057
Male, age 80, both hemispheres
233.2
Pedunculopontine tegmental nucleus nTPM: 224.9
2334
Male, age 80, both hemispheres
242.4
2338
Male, age 61, both hemispheres
230.8
1921
Female, age 85, both hemispheres
201.6
Pontine nuclei nTPM: 264.4
2319
Female, age 91, both hemispheres
300.0
1863
Male, age 55, unknown
276.8
2727
Male, age 61, right hemisphere
273.7
2115
Male, age 80, left hemisphere
264.1
2454
Male, age 74, left hemisphere
258.8
1968
Male, age 76, left hemisphere
257.9
2109
Female, age 72, unknown
254.1
2787
Female, age 85, both hemispheres
230.1
Pontine raphe nucleus nTPM: 213.4
2122
Female, age 85, midline
233.9
2853
Male, age 76, midline
193.0
Posteroventral cochlear nucleus nTPM: 294.0
2341
Male, age 80, both hemispheres
353.0
2135
Female, age 91, both hemispheres
345.3
2371
Male, age 61, both hemispheres
307.6
2752
Female, age 85, both hemispheres
244.5
2070
Male, age 76, both hemispheres
219.4
Principal sensory trigeminal nucleus nTPM: 241.1
2367
Female, age 91, left hemisphere
271.4
2324
Male, age 76, both hemispheres
236.2
2158
Male, age 61, both hemispheres
236.0
2008
Male, age 80, left hemisphere
220.9
Reticular pontine nucleus, caudal nTPM: 257.5
2559
Male, age 74, both hemispheres
283.8
2457
Female, age 91, both hemispheres
280.5
2092
Male, age 76, both hemispheres
254.5
2332
Male, age 80, right hemisphere
211.2
Reticular pontine nucleus, oral nTPM: 254.0
2366
Female, age 91, both hemispheres
274.4
1939
Male, age 80, both hemispheres
262.7
2361
Male, age 74, both hemispheres
261.2
2012
Female, age 85, both hemispheres
245.0
2167
Male, age 76, both hemispheres
226.5
Reticulotegmental nucleus nTPM: 259.4
2452
Male, age 74, both hemispheres
299.9
2322
Female, age 91, both hemispheres
269.9
2333
Male, age 80, both hemispheres
235.0
2325
Male, age 76, both hemispheres
232.8
Spinal trigeminal nucleus, oral nTPM: 218.6
2164
Male, age 80, both hemispheres
252.3
2737
Female, age 85, both hemispheres
204.0
1978
Male, age 76, both hemispheres
199.5
Subcoeruleus area nTPM: 247.4
2451
Male, age 74, both hemispheres
304.0
2369
Female, age 85, left hemisphere
265.9
1958
Male, age 80, both hemispheres
240.5
2089
Male, age 76, left hemisphere
226.0
2323
Female, age 91, left hemisphere
200.6
Superior olive nTPM: 257.8
2020
Male, age 76, both hemispheres
293.6
2561
Female, age 91, both hemispheres
264.2
1875
Female, age 85, both hemispheres
260.4
2364
Male, age 74, right hemisphere
238.9
2329
Male, age 80, right hemisphere
231.7
Ventral periolivary nuclei nTPM: 253.2
2023
Male, age 76, both hemispheres
298.9
2794
Female, age 91, left hemisphere
263.5
2165
Male, age 80, both hemispheres
233.5
2130
Female, age 85, both hemispheres
217.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 238.2
2840
Female, age 85, both hemispheres
262.8
2161
Male, age 80, both hemispheres
253.1
1959
Male, age 76, both hemispheres
251.3
2456
Female, age 91, both hemispheres
247.3
2449
Male, age 74, both hemispheres
213.4
2359
Male, age 61, both hemispheres
201.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
223.6
Pig sample
Sample description
nTPM
Pons nTPM: 223.6
Samples: 4
Max nTPM: 246.2
Min nTPM: 188.5
Sample A
Female
213.6
Sample B
Female
188.5
Sample C
Male
246.2
Sample D
Male
245.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.