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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
251.5
nTPM
Monaco:
584.7
nTPM
Schmiedel:
230.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
251.5
HPA sample
nTPM
gdT-cell nTPM: 95.1
Samples: 6
Max nTPM: 109.0
Min nTPM: 81.8
P10809_1007
103.5
P10809_1022
102.9
P10809_1041
109.0
P10809_1060
88.3
P10809_1077
85.1
P10809_1098
81.8
MAIT T-cell nTPM: 192.9
Samples: 6
Max nTPM: 240.0
Min nTPM: 125.4
P10809_1006
230.9
P10809_1024
224.5
P10809_1043
125.4
P10809_1062
184.0
P10809_1083
152.5
P10809_1097
240.0
Memory CD4 T-cell nTPM: 219.1
Samples: 6
Max nTPM: 285.0
Min nTPM: 143.8
P10809_1014
285.0
P10809_1026
260.8
P10809_1045
226.5
P10809_1064
187.0
P10809_1086
143.8
P10809_1113
211.6
Memory CD8 T-cell nTPM: 154.3
Samples: 5
Max nTPM: 218.3
Min nTPM: 122.1
P10809_1012
218.3
P10809_1027
143.7
P10809_1046
130.9
P10809_1065
122.1
P10809_1111
156.6
Naive CD4 T-cell nTPM: 251.5
Samples: 6
Max nTPM: 356.7
Min nTPM: 162.8
P10809_1015
356.7
P10809_1030
281.4
P10809_1049
229.7
P10809_1068
254.1
P10809_1085
162.8
P10809_1112
224.2
Naive CD8 T-cell nTPM: 207.6
Samples: 6
Max nTPM: 343.9
Min nTPM: 97.7
P10809_1016
343.9
P10809_1031
248.4
P10809_1050
172.7
P10809_1069
167.4
P10809_1087
97.7
P10809_1110
215.6
T-reg nTPM: 243.1
Samples: 6
Max nTPM: 305.2
Min nTPM: 179.4
P10809_1018
256.6
P10809_1037
305.2
P10809_1056
192.7
P10809_1075
257.4
P10809_1094
179.4
P10809_1106
267.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
584.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 460.1
Samples: 4
Max nTPM: 530.2
Min nTPM: 361.8
RHH5202_R3573
453.6
RHH5230_R3602
530.2
RHH5259_R3631
361.8
RHH5288_R3660
494.6
Effector memory CD8 T-cell nTPM: 347.5
Samples: 4
Max nTPM: 477.6
Min nTPM: 258.2
RHH5203_R3574
477.6
RHH5231_R3603
350.8
RHH5260_R3632
258.2
RHH5289_R3661
303.4
MAIT T-cell nTPM: 414.4
Samples: 4
Max nTPM: 442.3
Min nTPM: 401.9
RHH5233_R3605
402.2
RHH5205_R3576
401.9
RHH5262_R3634
442.3
RHH5297_R3663
411.1
Memory CD4 T-cell TFH nTPM: 493.0
Samples: 4
Max nTPM: 562.7
Min nTPM: 385.0
RHH5300_R3666
512.8
RHH5236_R3608
385.0
RHH5265_R3637
562.7
RHH5208_R3579
511.4
Memory CD4 T-cell Th1 nTPM: 445.7
Samples: 4
Max nTPM: 493.5
Min nTPM: 400.8
RHH5210_R3581
484.2
RHH5302_R3668
493.5
RHH5238_R3610
404.1
RHH5267_R3639
400.8
Memory CD4 T-cell Th1/Th17 nTPM: 422.2
Samples: 4
Max nTPM: 483.8
Min nTPM: 364.7
RHH5303_R3669
449.3
RHH5211_R3582
483.8
RHH5239_R3611
364.7
RHH5268_R3640
391.0
Memory CD4 T-cell Th17 nTPM: 473.0
Samples: 4
Max nTPM: 515.5
Min nTPM: 433.1
RHH5304_R3670
515.5
RHH5212_R3583
433.1
RHH5240_R3612
503.5
RHH5269_R3641
440.0
Memory CD4 T-cell Th2 nTPM: 570.4
Samples: 4
Max nTPM: 657.4
Min nTPM: 510.0
RHH5305_R3671
580.4
RHH5213_R3584
533.9
RHH5241_R3613
657.4
RHH5270_R3642
510.0
Naive CD4 T-cell nTPM: 545.5
Samples: 4
Max nTPM: 637.0
Min nTPM: 444.7
RHH5306_R3672
558.6
RHH5214_R3585
444.7
RHH5242_R3614
637.0
RHH5271_R3643
541.7
Naive CD8 T-cell nTPM: 584.7
Samples: 4
Max nTPM: 727.2
Min nTPM: 405.3
RHH5201_R3572
727.2
RHH5229_R3601
405.3
RHH5258_R3630
640.8
RHH5287_R3659
565.4
Non-Vd2 gdTCR nTPM: 274.7
Samples: 4
Max nTPM: 316.7
Min nTPM: 207.7
RHH5235_R3607
316.7
RHH5264_R3636
264.0
RHH5207_R3578
310.4
RHH5299_R3665
207.7
T-reg nTPM: 440.3
Samples: 4
Max nTPM: 546.7
Min nTPM: 382.8
RHH5301_R3667
546.7
RHH5237_R3609
382.8
RHH5266_R3638
440.0
RHH5209_R3580
391.6
Terminal effector memory CD4 T-cell nTPM: 305.2
Samples: 2
Max nTPM: 323.1
Min nTPM: 287.3
RHH5243_R3615
287.3
RHH5272_R3644
323.1
Terminal effector memory CD8 T-cell nTPM: 243.5
Samples: 4
Max nTPM: 278.3
Min nTPM: 213.6
RHH5232_R3604
278.3
RHH5204_R3575
213.6
RHH5261_R3633
224.1
RHH5296_R3662
258.0
Vd2 gdTCR nTPM: 351.7
Samples: 4
Max nTPM: 389.9
Min nTPM: 315.0
RHH5234_R3606
389.9
RHH5206_R3577
336.6
RHH5263_R3635
315.0
RHH5298_R3664
365.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.