HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:43.8 nTPM
HPA Brain:96.1 nTPM
GTEx:43.8 nTPM
FANTOM5:187.4 Scaled Tags Per Million
Pig:132.6 nTPM
Mouse:110.7 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027578
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.1
Sample id Sample description nTPM
Hippocampus
nTPM: 68.0
2529 Female, age 94, left hemisphere 81.6
2621 Female, age 67, right hemisphere 78.6
1911 Female, age 85, right hemisphere 75.2
2148 Female, age 91, left hemisphere 61.9
1898 Male, age 80, left hemisphere 58.6
1855 Male, age 76, left hemisphere 51.9
Dentate gyrus
nTPM: 75.7
2530 Female, age 94, left hemisphere 117.5
2010 Male, age 76, both hemispheres 77.5
1927 Female, age 91, both hemispheres 67.6
2246 Female, age 85, both hemispheres 66.8
2531 Female, age 67, both hemispheres 62.5
2528 Male, age 74, both hemispheres 62.2
Entorhinal gyrus
nTPM: 79.2
2764 Male, age 80, right hemisphere 94.5
2613 Female, age 94, left hemisphere 93.4
2117 Female, age 91, right hemisphere 89.3
1787 Male, age 76, left hemisphere 69.1
2686 Male, age 75, right hemisphere 65.6
1938 Female, age 85, left hemisphere 63.1
Hippocampus, CA1
nTPM: 54.6
1873 Female, age 85, both hemispheres 68.8
2082 Female, age 91, right hemisphere 61.8
2527 Male, age 74, both hemispheres 60.3
2749 Male, age 80, left hemisphere 50.0
2045 Male, age 76, both hemispheres 32.0
Hippocampus, CA2
nTPM: 74.7
1963 Male, age 80, left hemisphere 85.8
2437 Female, age 94, left hemisphere 83.1
1940 Female, age 85, left hemisphere 75.8
2249 Male, age 74, both hemispheres 72.5
1892 Male, age 76, both hemispheres 71.0
2113 Female, age 91, right hemisphere 60.2
Hippocampus, CA3
nTPM: 56.5
1891 Female, age 85, both hemispheres 92.7
1867 Male, age 76, both hemispheres 62.6
2436 Male, age 74, both hemispheres 48.5
2620 Female, age 94, left hemisphere 46.6
2137 Male, age 80, left hemisphere 45.3
2861 Female, age 67, both hemispheres 43.0
Parahippocampal cortex
nTPM: 64.9
2532 Female, age 72, left hemisphere 86.1
2692 Male, age 74, both hemispheres 82.8
1990 Female, age 91, right hemisphere 78.8
2245 Female, age 91, both hemispheres 69.3
1850 Male, age 80, both hemispheres 65.3
2018 Male, age 76, both hemispheres 63.4
1933 Female, age 85, both hemispheres 60.0
2693 Female, age 94, both hemispheres 52.7
2622 Female, age 67, right hemisphere 46.7
2250 Female, age 67, right hemisphere 44.0
Perirhinal gyrus
nTPM: 52.1
2848 Male, age 76, right hemisphere 58.9
1794 Male, age 80, right hemisphere 57.7
2521 Female, age 94, right hemisphere 51.0
1847 Female, age 91, left hemisphere 49.6
1841 Female, age 85, right hemisphere 43.2
Subiculum
nTPM: 96.1
2042 Male, age 76, both hemispheres 125.6
2438 Female, age 94, left hemisphere 113.5
1901 Male, age 80, both hemispheres 107.7
1977 Female, age 85, both hemispheres 89.7
2619 Male, age 74, both hemispheres 79.1
2729 Female, age 91, right hemisphere 61.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.8
Samples: 197

Max nTPM: 141.3
Min nTPM: 7.9
Std nTPM: 26.6
Median nTPM: 35.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 141.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 134.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 130.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 122.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 119.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 118.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 114.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 110.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 107.6
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 101.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 99.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 187.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 187.4
FF:10153-102I9 76 years, female 237.8
FF:10169-103B7 60 years, female 137.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 132.6
Pig sample Sample description nTPM
Subiculum
nTPM: 121.0
Samples: 4

Max nTPM: 159.2
Min nTPM: 97.7
Sample A Female 159.2
Sample B Female 112.7
Sample C Male 114.5
Sample D Male 97.7
Dorsal hippocampus
nTPM: 131.6
Samples: 4

Max nTPM: 159.5
Min nTPM: 86.5
Sample A Female 159.5
Sample B Female 124.3
Sample C Male 155.9
Sample D Male 86.5
Entorhinal cortex
nTPM: 132.7
Samples: 4

Max nTPM: 139.7
Min nTPM: 125.1
Sample A Female 132.1
Sample B Female 133.7
Sample C Male 139.7
Sample D Male 125.1
Ventral hippocampus
nTPM: 120.8
Samples: 4

Max nTPM: 144.2
Min nTPM: 88.4
Sample A Female 110.3
Sample B Female 88.4
Sample C Male 140.1
Sample D Male 144.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 110.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 110.7
Samples: 4

Max nTPM: 115.3
Min nTPM: 103.0
Sample A Male 112.8
Sample B Male 111.8
Sample C Female 103.0
Sample D Female 115.3
Hippocampal formation
nTPM: 103.7
Samples: 4

Max nTPM: 113.6
Min nTPM: 97.4
Sample A Male 97.4
Sample B Male 105.8
Sample C Female 113.6
Sample D Female 98.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
71924364 Antisense, RP_050623_01_G04, Mouse strain C57BL/6J (56 days, male) 8.8
70528073 Antisense, RP_050623_01_G04, Mouse strain C57BL/6J (56 days, male) 7.5

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