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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
98.8
nTPM
Monaco:
23.5
nTPM
Schmiedel:
8.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.8
HPA sample
nTPM
gdT-cell nTPM: 75.6
Samples: 6
Max nTPM: 107.4
Min nTPM: 51.4
P10809_1007
107.4
P10809_1022
71.1
P10809_1041
93.0
P10809_1060
62.6
P10809_1077
67.9
P10809_1098
51.4
MAIT T-cell nTPM: 86.4
Samples: 6
Max nTPM: 105.5
Min nTPM: 67.1
P10809_1006
87.8
P10809_1024
91.1
P10809_1043
82.4
P10809_1062
84.3
P10809_1083
67.1
P10809_1097
105.5
Memory CD4 T-cell nTPM: 83.8
Samples: 6
Max nTPM: 98.6
Min nTPM: 68.3
P10809_1014
97.3
P10809_1026
81.7
P10809_1045
98.6
P10809_1064
68.3
P10809_1086
82.0
P10809_1113
75.0
Memory CD8 T-cell nTPM: 94.5
Samples: 5
Max nTPM: 121.1
Min nTPM: 66.7
P10809_1012
121.1
P10809_1027
103.4
P10809_1046
98.8
P10809_1065
66.7
P10809_1111
82.3
Naive CD4 T-cell nTPM: 79.2
Samples: 6
Max nTPM: 112.3
Min nTPM: 52.0
P10809_1015
112.3
P10809_1030
81.8
P10809_1049
83.4
P10809_1068
77.7
P10809_1085
52.0
P10809_1112
68.2
Naive CD8 T-cell nTPM: 98.8
Samples: 6
Max nTPM: 163.7
Min nTPM: 82.1
P10809_1016
163.7
P10809_1031
82.1
P10809_1050
89.8
P10809_1069
85.3
P10809_1087
86.2
P10809_1110
85.7
T-reg nTPM: 90.5
Samples: 6
Max nTPM: 119.1
Min nTPM: 55.4
P10809_1018
109.0
P10809_1037
94.9
P10809_1056
55.4
P10809_1075
67.4
P10809_1094
119.1
P10809_1106
96.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 9.1
Samples: 4
Max nTPM: 17.6
Min nTPM: 0.0
RHH5202_R3573
0.0
RHH5230_R3602
17.6
RHH5259_R3631
17.2
RHH5288_R3660
1.7
Effector memory CD8 T-cell nTPM: 12.7
Samples: 4
Max nTPM: 15.6
Min nTPM: 9.8
RHH5203_R3574
10.5
RHH5231_R3603
15.6
RHH5260_R3632
14.7
RHH5289_R3661
9.8
MAIT T-cell nTPM: 10.0
Samples: 4
Max nTPM: 16.9
Min nTPM: 0.0
RHH5233_R3605
0.0
RHH5205_R3576
16.9
RHH5262_R3634
9.6
RHH5297_R3663
13.5
Memory CD4 T-cell TFH nTPM: 5.1
Samples: 4
Max nTPM: 7.6
Min nTPM: 3.4
RHH5300_R3666
4.1
RHH5236_R3608
5.4
RHH5265_R3637
7.6
RHH5208_R3579
3.4
Memory CD4 T-cell Th1 nTPM: 11.5
Samples: 4
Max nTPM: 23.0
Min nTPM: 3.1
RHH5210_R3581
3.7
RHH5302_R3668
3.1
RHH5238_R3610
16.2
RHH5267_R3639
23.0
Memory CD4 T-cell Th1/Th17 nTPM: 8.1
Samples: 4
Max nTPM: 11.0
Min nTPM: 5.3
RHH5303_R3669
5.3
RHH5211_R3582
7.0
RHH5239_R3611
9.1
RHH5268_R3640
11.0
Memory CD4 T-cell Th17 nTPM: 8.4
Samples: 4
Max nTPM: 15.0
Min nTPM: 2.0
RHH5304_R3670
15.0
RHH5212_R3583
8.3
RHH5240_R3612
8.2
RHH5269_R3641
2.0
Memory CD4 T-cell Th2 nTPM: 9.4
Samples: 4
Max nTPM: 16.7
Min nTPM: 1.2
RHH5305_R3671
16.7
RHH5213_R3584
11.3
RHH5241_R3613
1.2
RHH5270_R3642
8.4
Naive CD4 T-cell nTPM: 16.7
Samples: 4
Max nTPM: 22.6
Min nTPM: 12.3
RHH5306_R3672
18.6
RHH5214_R3585
22.6
RHH5242_R3614
12.3
RHH5271_R3643
13.3
Naive CD8 T-cell nTPM: 11.2
Samples: 4
Max nTPM: 18.7
Min nTPM: 5.1
RHH5201_R3572
5.1
RHH5229_R3601
18.7
RHH5258_R3630
7.6
RHH5287_R3659
13.2
Non-Vd2 gdTCR nTPM: 8.7
Samples: 4
Max nTPM: 10.3
Min nTPM: 5.4
RHH5235_R3607
5.4
RHH5264_R3636
10.0
RHH5207_R3578
9.1
RHH5299_R3665
10.3
T-reg nTPM: 10.3
Samples: 4
Max nTPM: 13.5
Min nTPM: 5.7
RHH5301_R3667
10.1
RHH5237_R3609
5.7
RHH5266_R3638
11.9
RHH5209_R3580
13.5
Terminal effector memory CD4 T-cell nTPM: 9.6
Samples: 2
Max nTPM: 12.1
Min nTPM: 7.1
RHH5243_R3615
12.1
RHH5272_R3644
7.1
Terminal effector memory CD8 T-cell nTPM: 17.1
Samples: 4
Max nTPM: 38.7
Min nTPM: 7.2
RHH5232_R3604
9.7
RHH5204_R3575
38.7
RHH5261_R3633
12.8
RHH5296_R3662
7.2
Vd2 gdTCR nTPM: 23.5
Samples: 4
Max nTPM: 48.6
Min nTPM: 8.1
RHH5234_R3606
8.1
RHH5206_R3577
48.6
RHH5263_R3635
12.9
RHH5298_R3664
24.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
