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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2512.5
nTPM
Monaco:
1339.4
nTPM
Schmiedel:
551.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2512.5
HPA sample
nTPM
gdT-cell nTPM: 1348.6
Samples: 6
Max nTPM: 1650.1
Min nTPM: 993.5
P10809_1007
1297.7
P10809_1022
1302.9
P10809_1041
1650.1
P10809_1060
993.5
P10809_1077
1246.5
P10809_1098
1600.9
MAIT T-cell nTPM: 1948.0
Samples: 6
Max nTPM: 2399.9
Min nTPM: 1596.9
P10809_1006
1959.4
P10809_1024
2106.6
P10809_1043
1596.9
P10809_1062
1721.3
P10809_1083
1904.1
P10809_1097
2399.9
Memory CD4 T-cell nTPM: 1933.8
Samples: 6
Max nTPM: 2189.6
Min nTPM: 1667.8
P10809_1014
2120.0
P10809_1026
2189.6
P10809_1045
1861.9
P10809_1064
1667.8
P10809_1086
1796.2
P10809_1113
1967.1
Memory CD8 T-cell nTPM: 1640.2
Samples: 5
Max nTPM: 1827.9
Min nTPM: 1328.7
P10809_1012
1703.8
P10809_1027
1827.9
P10809_1046
1328.7
P10809_1065
1523.8
P10809_1111
1816.7
Naive CD4 T-cell nTPM: 2115.0
Samples: 6
Max nTPM: 2444.7
Min nTPM: 1876.9
P10809_1015
2303.1
P10809_1030
2444.7
P10809_1049
1994.3
P10809_1068
1876.9
P10809_1085
2081.7
P10809_1112
1989.0
Naive CD8 T-cell nTPM: 1813.0
Samples: 6
Max nTPM: 2075.5
Min nTPM: 1547.5
P10809_1016
1927.3
P10809_1031
2075.5
P10809_1050
1647.1
P10809_1069
1725.4
P10809_1087
1547.5
P10809_1110
1955.2
T-reg nTPM: 2512.5
Samples: 6
Max nTPM: 3421.3
Min nTPM: 2088.9
P10809_1018
2404.5
P10809_1037
2325.3
P10809_1056
3421.3
P10809_1075
2088.9
P10809_1094
2118.6
P10809_1106
2716.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1339.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 933.0
Samples: 4
Max nTPM: 1164.5
Min nTPM: 673.5
RHH5202_R3573
1164.5
RHH5230_R3602
742.1
RHH5259_R3631
673.5
RHH5288_R3660
1152.0
Effector memory CD8 T-cell nTPM: 1091.6
Samples: 4
Max nTPM: 1454.3
Min nTPM: 854.5
RHH5203_R3574
1142.2
RHH5231_R3603
1454.3
RHH5260_R3632
915.5
RHH5289_R3661
854.5
MAIT T-cell nTPM: 1107.4
Samples: 4
Max nTPM: 1325.4
Min nTPM: 770.8
RHH5233_R3605
1275.7
RHH5205_R3576
770.8
RHH5262_R3634
1057.7
RHH5297_R3663
1325.4
Memory CD4 T-cell TFH nTPM: 1266.0
Samples: 4
Max nTPM: 1721.3
Min nTPM: 1030.6
RHH5300_R3666
1088.7
RHH5236_R3608
1721.3
RHH5265_R3637
1030.6
RHH5208_R3579
1223.4
Memory CD4 T-cell Th1 nTPM: 1060.9
Samples: 4
Max nTPM: 1481.9
Min nTPM: 795.0
RHH5210_R3581
1099.6
RHH5302_R3668
1481.9
RHH5238_R3610
867.0
RHH5267_R3639
795.0
Memory CD4 T-cell Th1/Th17 nTPM: 1191.8
Samples: 4
Max nTPM: 1881.9
Min nTPM: 532.0
RHH5303_R3669
1566.0
RHH5211_R3582
1881.9
RHH5239_R3611
532.0
RHH5268_R3640
787.4
Memory CD4 T-cell Th17 nTPM: 1043.0
Samples: 4
Max nTPM: 1735.9
Min nTPM: 563.7
RHH5304_R3670
999.2
RHH5212_R3583
1735.9
RHH5240_R3612
873.2
RHH5269_R3641
563.7
Memory CD4 T-cell Th2 nTPM: 1245.4
Samples: 4
Max nTPM: 1400.4
Min nTPM: 802.1
RHH5305_R3671
1400.4
RHH5213_R3584
1395.9
RHH5241_R3613
1383.2
RHH5270_R3642
802.1
Naive CD4 T-cell nTPM: 1255.4
Samples: 4
Max nTPM: 1705.4
Min nTPM: 885.0
RHH5306_R3672
1393.8
RHH5214_R3585
1705.4
RHH5242_R3614
1037.5
RHH5271_R3643
885.0
Naive CD8 T-cell nTPM: 1114.2
Samples: 4
Max nTPM: 1349.0
Min nTPM: 851.3
RHH5201_R3572
1349.0
RHH5229_R3601
851.3
RHH5258_R3630
1244.5
RHH5287_R3659
1011.9
Non-Vd2 gdTCR nTPM: 1153.4
Samples: 4
Max nTPM: 1755.2
Min nTPM: 653.9
RHH5235_R3607
653.9
RHH5264_R3636
1755.2
RHH5207_R3578
1082.1
RHH5299_R3665
1122.5
T-reg nTPM: 1266.9
Samples: 4
Max nTPM: 1828.2
Min nTPM: 773.1
RHH5301_R3667
1334.9
RHH5237_R3609
1828.2
RHH5266_R3638
773.1
RHH5209_R3580
1131.5
Terminal effector memory CD4 T-cell nTPM: 845.1
Samples: 2
Max nTPM: 1096.4
Min nTPM: 593.7
RHH5243_R3615
593.7
RHH5272_R3644
1096.4
Terminal effector memory CD8 T-cell nTPM: 1159.5
Samples: 4
Max nTPM: 1298.1
Min nTPM: 1016.7
RHH5232_R3604
1054.6
RHH5204_R3575
1298.1
RHH5261_R3633
1016.7
RHH5296_R3662
1268.7
Vd2 gdTCR nTPM: 1339.4
Samples: 4
Max nTPM: 1860.8
Min nTPM: 1080.7
RHH5234_R3606
1135.9
RHH5206_R3577
1860.8
RHH5263_R3635
1080.7
RHH5298_R3664
1280.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.