HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:21.2 nTPM
HPA Brain:43.3 nTPM
GTEx:21.2 nTPM
FANTOM5:83.7 Scaled Tags Per Million
Pig:58.5 nTPM
Mouse:44.9 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015641Antibody CAB008108
Glial cells Not detectedHigh
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.3
Sample id Sample description nTPM
Hippocampus
nTPM: 37.2
1898 Male, age 80, left hemisphere 47.3
2621 Female, age 67, right hemisphere 37.7
2148 Female, age 91, left hemisphere 36.9
2529 Female, age 94, left hemisphere 35.1
1855 Male, age 76, left hemisphere 33.7
1911 Female, age 85, right hemisphere 32.5
Dentate gyrus
nTPM: 38.5
1927 Female, age 91, both hemispheres 45.4
2010 Male, age 76, both hemispheres 41.0
2528 Male, age 74, both hemispheres 38.6
2531 Female, age 67, both hemispheres 36.8
2246 Female, age 85, both hemispheres 34.7
2530 Female, age 94, left hemisphere 34.2
Entorhinal gyrus
nTPM: 37.6
1787 Male, age 76, left hemisphere 43.0
2764 Male, age 80, right hemisphere 40.7
1938 Female, age 85, left hemisphere 38.8
2613 Female, age 94, left hemisphere 36.9
2117 Female, age 91, right hemisphere 33.9
2686 Male, age 75, right hemisphere 32.4
Hippocampus, CA1
nTPM: 42.9
2749 Male, age 80, left hemisphere 62.1
1873 Female, age 85, both hemispheres 40.8
2527 Male, age 74, both hemispheres 38.3
2045 Male, age 76, both hemispheres 37.6
2082 Female, age 91, right hemisphere 35.5
Hippocampus, CA2
nTPM: 38.7
1963 Male, age 80, left hemisphere 50.0
1892 Male, age 76, both hemispheres 45.4
2249 Male, age 74, both hemispheres 36.1
1940 Female, age 85, left hemisphere 34.2
2437 Female, age 94, left hemisphere 33.3
2113 Female, age 91, right hemisphere 33.0
Hippocampus, CA3
nTPM: 40.6
2137 Male, age 80, left hemisphere 52.0
2620 Female, age 94, left hemisphere 44.0
1867 Male, age 76, both hemispheres 42.2
1891 Female, age 85, both hemispheres 40.0
2861 Female, age 67, both hemispheres 33.7
2436 Male, age 74, both hemispheres 31.9
Parahippocampal cortex
nTPM: 35.9
1850 Male, age 80, both hemispheres 47.6
1933 Female, age 85, both hemispheres 42.0
2693 Female, age 94, both hemispheres 37.2
2018 Male, age 76, both hemispheres 36.5
2245 Female, age 91, both hemispheres 36.1
1990 Female, age 91, right hemisphere 35.3
2250 Female, age 67, right hemisphere 34.8
2532 Female, age 72, left hemisphere 32.7
2692 Male, age 74, both hemispheres 30.3
2622 Female, age 67, right hemisphere 26.1
Perirhinal gyrus
nTPM: 43.3
1847 Female, age 91, left hemisphere 49.7
1794 Male, age 80, right hemisphere 49.2
1841 Female, age 85, right hemisphere 42.0
2521 Female, age 94, right hemisphere 39.1
2848 Male, age 76, right hemisphere 36.7
Subiculum
nTPM: 35.7
1901 Male, age 80, both hemispheres 41.4
2729 Female, age 91, right hemisphere 36.7
1977 Female, age 85, both hemispheres 36.3
2438 Female, age 94, left hemisphere 36.2
2619 Male, age 74, both hemispheres 32.2
2042 Male, age 76, both hemispheres 31.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.2
Samples: 197

Max nTPM: 30.2
Min nTPM: 8.6
Std nTPM: 3.8
Median nTPM: 21.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 30.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 29.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 29.5
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 29.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 29.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 28.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 28.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 27.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 27.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 27.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.7
FF:10153-102I9 76 years, female 90.6
FF:10169-103B7 60 years, female 76.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.5
Pig sample Sample description nTPM
Subiculum
nTPM: 58.5
Samples: 4

Max nTPM: 69.4
Min nTPM: 53.1
Sample A Female 69.4
Sample B Female 55.4
Sample C Male 56.0
Sample D Male 53.1
Dorsal hippocampus
nTPM: 57.1
Samples: 4

Max nTPM: 63.0
Min nTPM: 47.3
Sample A Female 63.0
Sample B Female 61.7
Sample C Male 56.5
Sample D Male 47.3
Entorhinal cortex
nTPM: 54.4
Samples: 4

Max nTPM: 60.4
Min nTPM: 47.2
Sample A Female 60.4
Sample B Female 57.6
Sample C Male 52.5
Sample D Male 47.2
Ventral hippocampus
nTPM: 55.4
Samples: 4

Max nTPM: 62.0
Min nTPM: 45.6
Sample A Female 55.6
Sample B Female 45.6
Sample C Male 62.0
Sample D Male 58.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.9
Samples: 4

Max nTPM: 49.0
Min nTPM: 41.3
Sample A Male 44.0
Sample B Male 41.3
Sample C Female 45.3
Sample D Female 49.0
Hippocampal formation
nTPM: 41.6
Samples: 4

Max nTPM: 45.7
Min nTPM: 35.3
Sample A Male 39.8
Sample B Male 45.7
Sample C Female 45.4
Sample D Female 35.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
70194666 Antisense, RP_050517_01_H05, Mouse strain C57BL/6J (56 days, male) 5.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org