HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:49.5 nTPM
HPA Brain:52.4 nTPM
GTEx:49.5 nTPM
FANTOM5:114.0 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:49.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011324
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.4
Sample id Sample description nTPM
Hippocampus
nTPM: 39.7
1898 Male, age 80, left hemisphere 47.5
2529 Female, age 94, left hemisphere 42.0
2621 Female, age 67, right hemisphere 40.1
1855 Male, age 76, left hemisphere 39.3
1911 Female, age 85, right hemisphere 37.1
2148 Female, age 91, left hemisphere 32.3
Dentate gyrus
nTPM: 41.0
1927 Female, age 91, both hemispheres 50.5
2010 Male, age 76, both hemispheres 46.5
2530 Female, age 94, left hemisphere 41.6
2246 Female, age 85, both hemispheres 40.5
2528 Male, age 74, both hemispheres 35.3
2531 Female, age 67, both hemispheres 31.5
Entorhinal gyrus
nTPM: 40.6
2764 Male, age 80, right hemisphere 49.1
1938 Female, age 85, left hemisphere 48.2
1787 Male, age 76, left hemisphere 45.4
2117 Female, age 91, right hemisphere 39.7
2613 Female, age 94, left hemisphere 35.4
2686 Male, age 75, right hemisphere 26.0
Hippocampus, CA1
nTPM: 45.7
2749 Male, age 80, left hemisphere 61.9
1873 Female, age 85, both hemispheres 46.2
2527 Male, age 74, both hemispheres 43.4
2045 Male, age 76, both hemispheres 43.0
2082 Female, age 91, right hemisphere 33.7
Hippocampus, CA2
nTPM: 44.0
2249 Male, age 74, both hemispheres 54.4
1892 Male, age 76, both hemispheres 51.5
1963 Male, age 80, left hemisphere 48.1
1940 Female, age 85, left hemisphere 38.2
2437 Female, age 94, left hemisphere 37.0
2113 Female, age 91, right hemisphere 34.5
Hippocampus, CA3
nTPM: 41.3
2436 Male, age 74, both hemispheres 53.9
1867 Male, age 76, both hemispheres 46.2
2137 Male, age 80, left hemisphere 41.9
1891 Female, age 85, both hemispheres 41.5
2620 Female, age 94, left hemisphere 40.2
2861 Female, age 67, both hemispheres 24.0
Parahippocampal cortex
nTPM: 41.2
1850 Male, age 80, both hemispheres 51.5
1990 Female, age 91, right hemisphere 49.4
2245 Female, age 91, both hemispheres 49.1
1933 Female, age 85, both hemispheres 47.9
2250 Female, age 67, right hemisphere 46.5
2532 Female, age 72, left hemisphere 41.3
2018 Male, age 76, both hemispheres 38.2
2693 Female, age 94, both hemispheres 36.1
2692 Male, age 74, both hemispheres 28.6
2622 Female, age 67, right hemisphere 23.1
Perirhinal gyrus
nTPM: 52.4
1847 Female, age 91, left hemisphere 64.5
1841 Female, age 85, right hemisphere 52.8
1794 Male, age 80, right hemisphere 52.2
2848 Male, age 76, right hemisphere 47.5
2521 Female, age 94, right hemisphere 45.0
Subiculum
nTPM: 39.0
1977 Female, age 85, both hemispheres 50.9
1901 Male, age 80, both hemispheres 42.1
2438 Female, age 94, left hemisphere 41.9
2042 Male, age 76, both hemispheres 36.9
2619 Male, age 74, both hemispheres 33.6
2729 Female, age 91, right hemisphere 28.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.5
Samples: 197

Max nTPM: 80.9
Min nTPM: 15.3
Std nTPM: 13.2
Median nTPM: 48.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 80.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 79.1
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 77.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 77.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 76.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 75.9
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 74.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 74.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 74.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 73.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 73.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 114.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 114.0
FF:10169-103B7 60 years, female 147.4
FF:10153-102I9 76 years, female 80.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 22.4
Min nTPM: 15.5
Sample A Female 22.4
Sample B Female 16.1
Sample C Male 17.0
Sample D Male 15.5
Dorsal hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 21.5
Min nTPM: 14.8
Sample A Female 21.5
Sample B Female 20.1
Sample C Male 17.6
Sample D Male 14.8
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 17.9
Min nTPM: 12.2
Sample A Female 16.4
Sample B Female 17.9
Sample C Male 15.9
Sample D Male 12.2
Ventral hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 24.1
Min nTPM: 16.4
Sample A Female 24.1
Sample B Female 16.4
Sample C Male 24.1
Sample D Male 18.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.9
Samples: 4

Max nTPM: 49.2
Min nTPM: 39.9
Sample A Male 42.8
Sample B Male 43.5
Sample C Female 49.2
Sample D Female 39.9
Hippocampal formation
nTPM: 49.1
Samples: 4

Max nTPM: 54.5
Min nTPM: 42.5
Sample A Male 54.5
Sample B Male 48.4
Sample C Female 42.5
Sample D Female 51.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
17 Antisense, RP_Baylor_253934, Mouse strain C57BL/6J (56 days, male) 0.5
18 Antisense, RP_Baylor_253934, Mouse strain C57BL/6J (56 days, male) 0.1

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