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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
511.2
nTPM
Monaco:
62.6
nTPM
Schmiedel:
98.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
511.2
HPA sample
nTPM
gdT-cell nTPM: 228.9
Samples: 6
Max nTPM: 350.6
Min nTPM: 133.5
P10809_1007
194.8
P10809_1022
239.7
P10809_1041
350.6
P10809_1060
182.9
P10809_1077
133.5
P10809_1098
271.9
MAIT T-cell nTPM: 296.2
Samples: 6
Max nTPM: 384.4
Min nTPM: 197.4
P10809_1006
197.4
P10809_1024
268.6
P10809_1043
366.2
P10809_1062
290.6
P10809_1083
270.0
P10809_1097
384.4
Memory CD4 T-cell nTPM: 259.4
Samples: 6
Max nTPM: 357.3
Min nTPM: 193.3
P10809_1014
207.7
P10809_1026
270.8
P10809_1045
245.4
P10809_1064
281.7
P10809_1086
193.3
P10809_1113
357.3
Memory CD8 T-cell nTPM: 251.7
Samples: 5
Max nTPM: 300.0
Min nTPM: 205.4
P10809_1012
205.4
P10809_1027
267.4
P10809_1046
235.6
P10809_1065
250.2
P10809_1111
300.0
Naive CD4 T-cell nTPM: 165.8
Samples: 6
Max nTPM: 254.1
Min nTPM: 115.3
P10809_1015
115.3
P10809_1030
144.1
P10809_1049
254.1
P10809_1068
138.6
P10809_1085
134.5
P10809_1112
208.0
Naive CD8 T-cell nTPM: 191.7
Samples: 6
Max nTPM: 263.1
Min nTPM: 150.5
P10809_1016
160.0
P10809_1031
150.5
P10809_1050
193.9
P10809_1069
224.1
P10809_1087
158.5
P10809_1110
263.1
T-reg nTPM: 511.2
Samples: 6
Max nTPM: 764.9
Min nTPM: 306.6
P10809_1018
306.6
P10809_1037
346.5
P10809_1056
714.3
P10809_1075
490.3
P10809_1094
444.6
P10809_1106
764.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
62.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 33.3
Samples: 4
Max nTPM: 41.4
Min nTPM: 29.9
RHH5202_R3573
29.9
RHH5230_R3602
31.8
RHH5259_R3631
30.1
RHH5288_R3660
41.4
Effector memory CD8 T-cell nTPM: 37.9
Samples: 4
Max nTPM: 54.8
Min nTPM: 19.0
RHH5203_R3574
53.4
RHH5231_R3603
19.0
RHH5260_R3632
54.8
RHH5289_R3661
24.4
MAIT T-cell nTPM: 35.6
Samples: 4
Max nTPM: 50.1
Min nTPM: 25.0
RHH5233_R3605
25.0
RHH5205_R3576
50.1
RHH5262_R3634
30.8
RHH5297_R3663
36.5
Memory CD4 T-cell TFH nTPM: 42.4
Samples: 4
Max nTPM: 51.8
Min nTPM: 27.8
RHH5300_R3666
47.9
RHH5236_R3608
42.2
RHH5265_R3637
27.8
RHH5208_R3579
51.8
Memory CD4 T-cell Th1 nTPM: 36.3
Samples: 4
Max nTPM: 54.4
Min nTPM: 24.1
RHH5210_R3581
24.1
RHH5302_R3668
54.4
RHH5238_R3610
32.0
RHH5267_R3639
34.5
Memory CD4 T-cell Th1/Th17 nTPM: 38.0
Samples: 4
Max nTPM: 48.0
Min nTPM: 15.0
RHH5303_R3669
44.1
RHH5211_R3582
48.0
RHH5239_R3611
15.0
RHH5268_R3640
44.9
Memory CD4 T-cell Th17 nTPM: 39.2
Samples: 4
Max nTPM: 56.8
Min nTPM: 14.9
RHH5304_R3670
45.9
RHH5212_R3583
56.8
RHH5240_R3612
14.9
RHH5269_R3641
39.2
Memory CD4 T-cell Th2 nTPM: 36.4
Samples: 4
Max nTPM: 54.9
Min nTPM: 15.6
RHH5305_R3671
54.9
RHH5213_R3584
42.4
RHH5241_R3613
15.6
RHH5270_R3642
32.5
Naive CD4 T-cell nTPM: 24.7
Samples: 4
Max nTPM: 43.4
Min nTPM: 10.3
RHH5306_R3672
33.0
RHH5214_R3585
43.4
RHH5242_R3614
10.3
RHH5271_R3643
12.1
Naive CD8 T-cell nTPM: 20.8
Samples: 4
Max nTPM: 32.5
Min nTPM: 13.9
RHH5201_R3572
13.9
RHH5229_R3601
19.4
RHH5258_R3630
17.3
RHH5287_R3659
32.5
Non-Vd2 gdTCR nTPM: 40.6
Samples: 4
Max nTPM: 49.3
Min nTPM: 26.7
RHH5235_R3607
26.7
RHH5264_R3636
49.3
RHH5207_R3578
39.9
RHH5299_R3665
46.4
T-reg nTPM: 45.8
Samples: 4
Max nTPM: 67.4
Min nTPM: 22.5
RHH5301_R3667
59.7
RHH5237_R3609
22.5
RHH5266_R3638
33.7
RHH5209_R3580
67.4
Terminal effector memory CD4 T-cell nTPM: 24.7
Samples: 2
Max nTPM: 34.7
Min nTPM: 14.6
RHH5243_R3615
14.6
RHH5272_R3644
34.7
Terminal effector memory CD8 T-cell nTPM: 62.6
Samples: 4
Max nTPM: 148.8
Min nTPM: 11.9
RHH5232_R3604
11.9
RHH5204_R3575
148.8
RHH5261_R3633
47.5
RHH5296_R3662
42.2
Vd2 gdTCR nTPM: 61.4
Samples: 4
Max nTPM: 132.5
Min nTPM: 24.7
RHH5234_R3606
24.7
RHH5206_R3577
132.5
RHH5263_R3635
37.0
RHH5298_R3664
51.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
