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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
63.6
nTPM
Monaco:
258.0
nTPM
Schmiedel:
149.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
63.6
HPA sample
nTPM
gdT-cell nTPM: 63.6
Samples: 6
Max nTPM: 84.2
Min nTPM: 28.1
P10809_1007
28.1
P10809_1022
79.6
P10809_1041
84.2
P10809_1060
60.3
P10809_1077
59.0
P10809_1098
70.4
MAIT T-cell nTPM: 55.6
Samples: 6
Max nTPM: 74.1
Min nTPM: 35.6
P10809_1006
35.6
P10809_1024
74.1
P10809_1043
65.6
P10809_1062
50.5
P10809_1083
48.0
P10809_1097
59.8
Memory CD4 T-cell nTPM: 46.1
Samples: 6
Max nTPM: 58.6
Min nTPM: 18.8
P10809_1014
18.8
P10809_1026
54.0
P10809_1045
58.6
P10809_1064
47.7
P10809_1086
46.5
P10809_1113
51.1
Memory CD8 T-cell nTPM: 59.3
Samples: 5
Max nTPM: 86.6
Min nTPM: 31.5
P10809_1012
31.5
P10809_1027
66.8
P10809_1046
86.6
P10809_1065
51.9
P10809_1111
59.8
Naive CD4 T-cell nTPM: 25.8
Samples: 6
Max nTPM: 32.8
Min nTPM: 11.7
P10809_1015
11.7
P10809_1030
32.8
P10809_1049
29.5
P10809_1068
20.3
P10809_1085
30.0
P10809_1112
30.6
Naive CD8 T-cell nTPM: 44.9
Samples: 6
Max nTPM: 58.8
Min nTPM: 14.1
P10809_1016
14.1
P10809_1031
58.8
P10809_1050
51.9
P10809_1069
58.7
P10809_1087
52.7
P10809_1110
33.2
T-reg nTPM: 50.1
Samples: 6
Max nTPM: 67.3
Min nTPM: 28.5
P10809_1018
32.9
P10809_1037
48.8
P10809_1056
61.4
P10809_1075
28.5
P10809_1094
67.3
P10809_1106
61.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
258.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 173.6
Samples: 4
Max nTPM: 226.9
Min nTPM: 144.1
RHH5202_R3573
146.4
RHH5230_R3602
226.9
RHH5259_R3631
144.1
RHH5288_R3660
177.0
Effector memory CD8 T-cell nTPM: 216.4
Samples: 4
Max nTPM: 257.1
Min nTPM: 180.1
RHH5203_R3574
202.8
RHH5231_R3603
180.1
RHH5260_R3632
225.4
RHH5289_R3661
257.1
MAIT T-cell nTPM: 205.0
Samples: 4
Max nTPM: 228.8
Min nTPM: 185.6
RHH5233_R3605
202.3
RHH5205_R3576
228.8
RHH5262_R3634
203.1
RHH5297_R3663
185.6
Memory CD4 T-cell TFH nTPM: 142.3
Samples: 4
Max nTPM: 155.8
Min nTPM: 119.0
RHH5300_R3666
119.0
RHH5236_R3608
155.8
RHH5265_R3637
145.0
RHH5208_R3579
149.4
Memory CD4 T-cell Th1 nTPM: 142.4
Samples: 4
Max nTPM: 160.6
Min nTPM: 134.9
RHH5210_R3581
138.0
RHH5302_R3668
136.1
RHH5238_R3610
134.9
RHH5267_R3639
160.6
Memory CD4 T-cell Th1/Th17 nTPM: 164.0
Samples: 4
Max nTPM: 190.4
Min nTPM: 148.6
RHH5303_R3669
148.6
RHH5211_R3582
165.1
RHH5239_R3611
190.4
RHH5268_R3640
151.7
Memory CD4 T-cell Th17 nTPM: 200.5
Samples: 4
Max nTPM: 238.5
Min nTPM: 160.4
RHH5304_R3670
210.7
RHH5212_R3583
160.4
RHH5240_R3612
238.5
RHH5269_R3641
192.3
Memory CD4 T-cell Th2 nTPM: 166.9
Samples: 4
Max nTPM: 176.9
Min nTPM: 160.3
RHH5305_R3671
176.9
RHH5213_R3584
160.3
RHH5241_R3613
167.1
RHH5270_R3642
163.1
Naive CD4 T-cell nTPM: 96.5
Samples: 4
Max nTPM: 109.5
Min nTPM: 82.7
RHH5306_R3672
106.8
RHH5214_R3585
87.1
RHH5242_R3614
82.7
RHH5271_R3643
109.5
Naive CD8 T-cell nTPM: 115.8
Samples: 4
Max nTPM: 126.3
Min nTPM: 98.4
RHH5201_R3572
114.1
RHH5229_R3601
126.3
RHH5258_R3630
98.4
RHH5287_R3659
124.2
Non-Vd2 gdTCR nTPM: 237.5
Samples: 4
Max nTPM: 260.5
Min nTPM: 208.8
RHH5235_R3607
250.8
RHH5264_R3636
208.8
RHH5207_R3578
260.5
RHH5299_R3665
230.0
T-reg nTPM: 135.7
Samples: 4
Max nTPM: 171.9
Min nTPM: 110.5
RHH5301_R3667
125.3
RHH5237_R3609
171.9
RHH5266_R3638
135.2
RHH5209_R3580
110.5
Terminal effector memory CD4 T-cell nTPM: 201.8
Samples: 2
Max nTPM: 221.0
Min nTPM: 182.5
RHH5243_R3615
221.0
RHH5272_R3644
182.5
Terminal effector memory CD8 T-cell nTPM: 258.0
Samples: 4
Max nTPM: 271.0
Min nTPM: 247.9
RHH5232_R3604
271.0
RHH5204_R3575
247.9
RHH5261_R3633
252.6
RHH5296_R3662
260.6
Vd2 gdTCR nTPM: 210.2
Samples: 4
Max nTPM: 264.9
Min nTPM: 187.9
RHH5234_R3606
197.6
RHH5206_R3577
187.9
RHH5263_R3635
264.9
RHH5298_R3664
190.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
