We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
16.2
nTPM
Monaco:
94.0
nTPM
Schmiedel:
116.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.2
HPA sample
nTPM
gdT-cell nTPM: 10.8
Samples: 6
Max nTPM: 15.6
Min nTPM: 7.4
P10809_1007
10.2
P10809_1022
8.2
P10809_1041
15.6
P10809_1060
11.8
P10809_1077
11.8
P10809_1098
7.4
MAIT T-cell nTPM: 10.6
Samples: 6
Max nTPM: 14.0
Min nTPM: 8.3
P10809_1006
8.6
P10809_1024
14.0
P10809_1043
8.9
P10809_1062
8.3
P10809_1083
13.0
P10809_1097
10.5
Memory CD4 T-cell nTPM: 11.0
Samples: 6
Max nTPM: 12.5
Min nTPM: 9.1
P10809_1014
11.8
P10809_1026
12.3
P10809_1045
10.4
P10809_1064
9.1
P10809_1086
12.5
P10809_1113
9.6
Memory CD8 T-cell nTPM: 10.7
Samples: 5
Max nTPM: 12.1
Min nTPM: 9.1
P10809_1012
9.1
P10809_1027
11.9
P10809_1046
12.1
P10809_1065
9.6
P10809_1111
10.6
Naive CD4 T-cell nTPM: 16.3
Samples: 6
Max nTPM: 21.2
Min nTPM: 14.7
P10809_1015
14.9
P10809_1030
21.2
P10809_1049
14.7
P10809_1068
16.5
P10809_1085
15.0
P10809_1112
15.2
Naive CD8 T-cell nTPM: 14.0
Samples: 6
Max nTPM: 21.6
Min nTPM: 9.6
P10809_1016
13.6
P10809_1031
21.6
P10809_1050
16.0
P10809_1069
9.9
P10809_1087
9.6
P10809_1110
13.2
T-reg nTPM: 14.3
Samples: 6
Max nTPM: 17.5
Min nTPM: 10.5
P10809_1018
10.5
P10809_1037
10.8
P10809_1056
14.8
P10809_1075
17.5
P10809_1094
16.4
P10809_1106
16.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
94.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 75.8
Samples: 4
Max nTPM: 91.8
Min nTPM: 63.1
RHH5202_R3573
91.8
RHH5230_R3602
81.8
RHH5259_R3631
66.5
RHH5288_R3660
63.1
Effector memory CD8 T-cell nTPM: 57.8
Samples: 4
Max nTPM: 64.5
Min nTPM: 46.9
RHH5203_R3574
60.4
RHH5231_R3603
46.9
RHH5260_R3632
59.2
RHH5289_R3661
64.5
MAIT T-cell nTPM: 67.3
Samples: 4
Max nTPM: 79.0
Min nTPM: 55.4
RHH5233_R3605
79.0
RHH5205_R3576
57.1
RHH5262_R3634
55.4
RHH5297_R3663
77.5
Memory CD4 T-cell TFH nTPM: 73.5
Samples: 4
Max nTPM: 90.4
Min nTPM: 58.9
RHH5300_R3666
90.4
RHH5236_R3608
67.2
RHH5265_R3637
77.3
RHH5208_R3579
58.9
Memory CD4 T-cell Th1 nTPM: 73.5
Samples: 4
Max nTPM: 84.5
Min nTPM: 60.1
RHH5210_R3581
84.5
RHH5302_R3668
83.2
RHH5238_R3610
66.3
RHH5267_R3639
60.1
Memory CD4 T-cell Th1/Th17 nTPM: 79.0
Samples: 4
Max nTPM: 105.9
Min nTPM: 60.4
RHH5303_R3669
74.0
RHH5211_R3582
75.8
RHH5239_R3611
105.9
RHH5268_R3640
60.4
Memory CD4 T-cell Th17 nTPM: 69.2
Samples: 4
Max nTPM: 75.6
Min nTPM: 59.6
RHH5304_R3670
75.6
RHH5212_R3583
73.3
RHH5240_R3612
59.6
RHH5269_R3641
68.3
Memory CD4 T-cell Th2 nTPM: 81.3
Samples: 4
Max nTPM: 110.1
Min nTPM: 56.2
RHH5305_R3671
82.6
RHH5213_R3584
76.2
RHH5241_R3613
110.1
RHH5270_R3642
56.2
Naive CD4 T-cell nTPM: 79.7
Samples: 4
Max nTPM: 91.5
Min nTPM: 66.9
RHH5306_R3672
66.9
RHH5214_R3585
74.9
RHH5242_R3614
91.5
RHH5271_R3643
85.5
Naive CD8 T-cell nTPM: 94.0
Samples: 4
Max nTPM: 119.3
Min nTPM: 68.2
RHH5201_R3572
119.3
RHH5229_R3601
83.0
RHH5258_R3630
68.2
RHH5287_R3659
105.6
Non-Vd2 gdTCR nTPM: 56.2
Samples: 4
Max nTPM: 63.9
Min nTPM: 46.9
RHH5235_R3607
61.4
RHH5264_R3636
52.4
RHH5207_R3578
46.9
RHH5299_R3665
63.9
T-reg nTPM: 80.8
Samples: 4
Max nTPM: 90.6
Min nTPM: 74.2
RHH5301_R3667
79.6
RHH5237_R3609
90.6
RHH5266_R3638
74.2
RHH5209_R3580
78.8
Terminal effector memory CD4 T-cell nTPM: 64.0
Samples: 2
Max nTPM: 68.9
Min nTPM: 59.0
RHH5243_R3615
59.0
RHH5272_R3644
68.9
Terminal effector memory CD8 T-cell nTPM: 57.4
Samples: 4
Max nTPM: 69.5
Min nTPM: 42.1
RHH5232_R3604
53.9
RHH5204_R3575
64.1
RHH5261_R3633
42.1
RHH5296_R3662
69.5
Vd2 gdTCR nTPM: 66.1
Samples: 4
Max nTPM: 76.6
Min nTPM: 53.7
RHH5234_R3606
69.8
RHH5206_R3577
53.7
RHH5263_R3635
64.2
RHH5298_R3664
76.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
