HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:29.0 nTPM
HPA Brain:32.8 nTPM
GTEx:29.0 nTPM
FANTOM5:19.9 Scaled Tags Per Million
Pig:23.1 nTPM
Mouse:67.0 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039057
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.8
Sample id Sample description nTPM
Hippocampus
nTPM: 30.2
1898 Male, age 80, left hemisphere 35.3
2529 Female, age 94, left hemisphere 30.4
1911 Female, age 85, right hemisphere 30.0
1855 Male, age 76, left hemisphere 29.0
2148 Female, age 91, left hemisphere 29.0
2621 Female, age 67, right hemisphere 27.5
Dentate gyrus
nTPM: 29.4
2528 Male, age 74, both hemispheres 34.8
2530 Female, age 94, left hemisphere 31.5
1927 Female, age 91, both hemispheres 30.4
2010 Male, age 76, both hemispheres 27.5
2531 Female, age 67, both hemispheres 26.9
2246 Female, age 85, both hemispheres 25.2
Entorhinal gyrus
nTPM: 32.8
2764 Male, age 80, right hemisphere 38.8
2613 Female, age 94, left hemisphere 35.5
1938 Female, age 85, left hemisphere 35.0
1787 Male, age 76, left hemisphere 31.0
2117 Female, age 91, right hemisphere 29.3
2686 Male, age 75, right hemisphere 27.5
Hippocampus, CA1
nTPM: 30.0
2749 Male, age 80, left hemisphere 39.7
1873 Female, age 85, both hemispheres 31.2
2082 Female, age 91, right hemisphere 28.5
2045 Male, age 76, both hemispheres 26.7
2527 Male, age 74, both hemispheres 23.8
Hippocampus, CA2
nTPM: 31.9
2249 Male, age 74, both hemispheres 36.1
1892 Male, age 76, both hemispheres 33.6
1963 Male, age 80, left hemisphere 33.0
2437 Female, age 94, left hemisphere 30.8
2113 Female, age 91, right hemisphere 29.9
1940 Female, age 85, left hemisphere 28.0
Hippocampus, CA3
nTPM: 32.4
2137 Male, age 80, left hemisphere 35.6
2436 Male, age 74, both hemispheres 35.6
2861 Female, age 67, both hemispheres 31.4
1867 Male, age 76, both hemispheres 31.3
1891 Female, age 85, both hemispheres 30.6
2620 Female, age 94, left hemisphere 30.1
Parahippocampal cortex
nTPM: 28.8
1990 Female, age 91, right hemisphere 36.8
1933 Female, age 85, both hemispheres 32.8
1850 Male, age 80, both hemispheres 31.5
2532 Female, age 72, left hemisphere 29.3
2693 Female, age 94, both hemispheres 28.1
2622 Female, age 67, right hemisphere 27.9
2245 Female, age 91, both hemispheres 27.1
2250 Female, age 67, right hemisphere 26.2
2692 Male, age 74, both hemispheres 25.0
2018 Male, age 76, both hemispheres 23.5
Perirhinal gyrus
nTPM: 31.9
1794 Male, age 80, right hemisphere 38.2
1847 Female, age 91, left hemisphere 34.2
1841 Female, age 85, right hemisphere 32.5
2848 Male, age 76, right hemisphere 27.3
2521 Female, age 94, right hemisphere 27.2
Subiculum
nTPM: 30.0
1977 Female, age 85, both hemispheres 31.8
2042 Male, age 76, both hemispheres 31.6
1901 Male, age 80, both hemispheres 31.3
2729 Female, age 91, right hemisphere 29.0
2619 Male, age 74, both hemispheres 28.9
2438 Female, age 94, left hemisphere 27.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.0
Samples: 197

Max nTPM: 54.9
Min nTPM: 8.1
Std nTPM: 7.4
Median nTPM: 28.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 54.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 44.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 44.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 43.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 43.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 43.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 42.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 41.1
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 41.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 40.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.9
FF:10153-102I9 76 years, female 24.2
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.1
Pig sample Sample description nTPM
Subiculum
nTPM: 18.0
Samples: 4

Max nTPM: 23.7
Min nTPM: 14.7
Sample A Female 23.7
Sample B Female 17.7
Sample C Male 16.0
Sample D Male 14.7
Dorsal hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 33.0
Min nTPM: 18.3
Sample A Female 33.0
Sample B Female 22.3
Sample C Male 18.3
Sample D Male 18.8
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 21.0
Min nTPM: 15.6
Sample A Female 19.9
Sample B Female 20.9
Sample C Male 21.0
Sample D Male 15.6
Ventral hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 22.9
Min nTPM: 14.8
Sample A Female 19.5
Sample B Female 14.8
Sample C Male 22.0
Sample D Male 22.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 67.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 66.6
Samples: 4

Max nTPM: 71.2
Min nTPM: 62.4
Sample A Male 71.2
Sample B Male 67.1
Sample C Female 65.5
Sample D Female 62.4
Hippocampal formation
nTPM: 67.0
Samples: 4

Max nTPM: 71.2
Min nTPM: 62.6
Sample A Male 68.5
Sample B Male 62.6
Sample C Female 65.8
Sample D Female 71.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
68076881 Antisense, RP_040923_02_H03, Mouse strain C57BL/6J (56 days, male) 3.1

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