HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.4 nTPM
HPA Brain:21.3 nTPM
GTEx:11.4 nTPM
FANTOM5:1.4 Scaled Tags Per Million
Pig:1.1 nTPM
Mouse:0.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.3
Sample id Sample description nTPM
Hippocampus
nTPM: 9.7
1911 Female, age 85, right hemisphere 16.0
2621 Female, age 67, right hemisphere 14.4
1855 Male, age 76, left hemisphere 11.9
2148 Female, age 91, left hemisphere 6.6
2529 Female, age 94, left hemisphere 6.0
1898 Male, age 80, left hemisphere 3.3
Dentate gyrus
nTPM: 21.3
2531 Female, age 67, both hemispheres 51.4
2528 Male, age 74, both hemispheres 35.0
2246 Female, age 85, both hemispheres 19.8
2010 Male, age 76, both hemispheres 11.5
1927 Female, age 91, both hemispheres 9.7
2530 Female, age 94, left hemisphere 0.7
Entorhinal gyrus
nTPM: 1.3
1787 Male, age 76, left hemisphere 3.1
1938 Female, age 85, left hemisphere 1.6
2686 Male, age 75, right hemisphere 1.1
2613 Female, age 94, left hemisphere 0.9
2117 Female, age 91, right hemisphere 0.7
2764 Male, age 80, right hemisphere 0.5
Hippocampus, CA1
nTPM: 20.0
2045 Male, age 76, both hemispheres 60.6
2527 Male, age 74, both hemispheres 21.0
1873 Female, age 85, both hemispheres 10.2
2082 Female, age 91, right hemisphere 6.2
2749 Male, age 80, left hemisphere 1.9
Hippocampus, CA2
nTPM: 3.2
1892 Male, age 76, both hemispheres 7.8
2249 Male, age 74, both hemispheres 5.6
1940 Female, age 85, left hemisphere 2.6
2113 Female, age 91, right hemisphere 2.4
2437 Female, age 94, left hemisphere 0.6
1963 Male, age 80, left hemisphere 0.4
Hippocampus, CA3
nTPM: 18.8
2861 Female, age 67, both hemispheres 48.1
2620 Female, age 94, left hemisphere 19.2
1867 Male, age 76, both hemispheres 15.8
2436 Male, age 74, both hemispheres 10.9
2137 Male, age 80, left hemisphere 9.5
1891 Female, age 85, both hemispheres 9.3
Parahippocampal cortex
nTPM: 3.2
2018 Male, age 76, both hemispheres 7.2
2250 Female, age 67, right hemisphere 6.7
2245 Female, age 91, both hemispheres 6.5
1933 Female, age 85, both hemispheres 5.1
2622 Female, age 67, right hemisphere 2.0
2693 Female, age 94, both hemispheres 1.3
1850 Male, age 80, both hemispheres 1.0
1990 Female, age 91, right hemisphere 1.0
2692 Male, age 74, both hemispheres 0.8
2532 Female, age 72, left hemisphere 0.4
Perirhinal gyrus
nTPM: 5.0
1847 Female, age 91, left hemisphere 11.3
2521 Female, age 94, right hemisphere 7.6
1841 Female, age 85, right hemisphere 3.5
1794 Male, age 80, right hemisphere 1.5
2848 Male, age 76, right hemisphere 1.1
Subiculum
nTPM: 4.1
2729 Female, age 91, right hemisphere 12.8
1901 Male, age 80, both hemispheres 5.0
2042 Male, age 76, both hemispheres 3.9
2619 Male, age 74, both hemispheres 1.6
1977 Female, age 85, both hemispheres 1.2
2438 Female, age 94, left hemisphere 0.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.4
Samples: 197

Max nTPM: 141.1
Min nTPM: 0.0
Std nTPM: 16.6
Median nTPM: 5.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 141.1
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 75.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 67.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 65.4
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 62.0
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 55.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 48.0
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 46.6
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 42.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 42.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 41.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.4
FF:10169-103B7 60 years, female 2.0
FF:10153-102I9 76 years, female 0.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.1
Pig sample Sample description nTPM
Subiculum
nTPM: 0.9
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.5
Sample A Female 1.4
Sample B Female 0.7
Sample C Male 0.8
Sample D Male 0.5
Dorsal hippocampus
nTPM: 0.4
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.3
Sample A Female 0.3
Sample B Female 0.5
Sample C Male 0.5
Sample D Male 0.4
Entorhinal cortex
nTPM: 0.9
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.5
Sample A Female 1.4
Sample B Female 0.5
Sample C Male 1.2
Sample D Male 0.6
Ventral hippocampus
nTPM: 1.1
Samples: 4

Max nTPM: 2.2
Min nTPM: 0.1
Sample A Female 1.0
Sample B Female 1.1
Sample C Male 2.2
Sample D Male 0.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.2
Sample C Female 0.2
Sample D Female 0.1
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.0
Sample C Female 0.2
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
75551473 Antisense, RP_060523_02_B09, Mouse strain C57BL/6J (56 days, male) 0.2
69860986 Antisense, RP_050331_04_B09, Mouse strain C57BL/6J (56 days, male) 0.0

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