HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:17.4 nTPM
HPA Brain:24.0 nTPM
GTEx:17.4 nTPM
FANTOM5:13.9 Scaled Tags Per Million
Pig:32.4 nTPM
Mouse:38.4 nTPM
Allen mouse:15.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041314
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.0
Sample id Sample description nTPM
Hippocampus
nTPM: 22.5
2529 Female, age 94, left hemisphere 26.8
2621 Female, age 67, right hemisphere 23.0
2148 Female, age 91, left hemisphere 22.9
1855 Male, age 76, left hemisphere 21.1
1911 Female, age 85, right hemisphere 21.0
1898 Male, age 80, left hemisphere 20.2
Dentate gyrus
nTPM: 22.3
2530 Female, age 94, left hemisphere 29.6
2010 Male, age 76, both hemispheres 24.3
2531 Female, age 67, both hemispheres 23.9
2246 Female, age 85, both hemispheres 22.4
1927 Female, age 91, both hemispheres 17.0
2528 Male, age 74, both hemispheres 16.7
Entorhinal gyrus
nTPM: 23.9
2686 Male, age 75, right hemisphere 28.5
2117 Female, age 91, right hemisphere 26.8
2764 Male, age 80, right hemisphere 24.8
1787 Male, age 76, left hemisphere 23.3
2613 Female, age 94, left hemisphere 20.4
1938 Female, age 85, left hemisphere 19.4
Hippocampus, CA1
nTPM: 20.4
2749 Male, age 80, left hemisphere 22.5
2045 Male, age 76, both hemispheres 21.2
2527 Male, age 74, both hemispheres 20.6
2082 Female, age 91, right hemisphere 19.4
1873 Female, age 85, both hemispheres 18.4
Hippocampus, CA2
nTPM: 19.8
1940 Female, age 85, left hemisphere 24.5
2113 Female, age 91, right hemisphere 21.0
1963 Male, age 80, left hemisphere 19.7
2437 Female, age 94, left hemisphere 19.2
1892 Male, age 76, both hemispheres 17.6
2249 Male, age 74, both hemispheres 16.9
Hippocampus, CA3
nTPM: 20.4
2861 Female, age 67, both hemispheres 22.9
2137 Male, age 80, left hemisphere 21.8
2436 Male, age 74, both hemispheres 21.0
1867 Male, age 76, both hemispheres 19.6
1891 Female, age 85, both hemispheres 19.4
2620 Female, age 94, left hemisphere 17.8
Parahippocampal cortex
nTPM: 22.8
2532 Female, age 72, left hemisphere 27.9
2245 Female, age 91, both hemispheres 27.1
2018 Male, age 76, both hemispheres 25.5
2622 Female, age 67, right hemisphere 25.0
2692 Male, age 74, both hemispheres 21.6
1933 Female, age 85, both hemispheres 21.4
1850 Male, age 80, both hemispheres 20.8
1990 Female, age 91, right hemisphere 20.5
2250 Female, age 67, right hemisphere 19.2
2693 Female, age 94, both hemispheres 19.0
Perirhinal gyrus
nTPM: 22.0
2521 Female, age 94, right hemisphere 27.6
1794 Male, age 80, right hemisphere 22.5
2848 Male, age 76, right hemisphere 20.7
1841 Female, age 85, right hemisphere 20.6
1847 Female, age 91, left hemisphere 18.5
Subiculum
nTPM: 24.0
2042 Male, age 76, both hemispheres 30.6
1901 Male, age 80, both hemispheres 25.4
2438 Female, age 94, left hemisphere 24.2
1977 Female, age 85, both hemispheres 23.6
2619 Male, age 74, both hemispheres 21.5
2729 Female, age 91, right hemisphere 18.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.4
Samples: 197

Max nTPM: 34.4
Min nTPM: 9.3
Std nTPM: 4.4
Median nTPM: 16.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 34.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 33.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 30.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 30.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 30.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 27.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 27.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 27.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 27.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 27.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.9
FF:10153-102I9 76 years, female 20.7
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.4
Pig sample Sample description nTPM
Subiculum
nTPM: 29.1
Samples: 4

Max nTPM: 35.2
Min nTPM: 24.2
Sample A Female 35.2
Sample B Female 30.5
Sample C Male 24.2
Sample D Male 26.6
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 36.9
Min nTPM: 25.1
Sample A Female 36.9
Sample B Female 28.7
Sample C Male 36.7
Sample D Male 25.1
Entorhinal cortex
nTPM: 32.4
Samples: 4

Max nTPM: 35.4
Min nTPM: 28.1
Sample A Female 35.4
Sample B Female 34.7
Sample C Male 31.5
Sample D Male 28.1
Ventral hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 30.3
Min nTPM: 20.3
Sample A Female 28.1
Sample B Female 20.3
Sample C Male 30.3
Sample D Male 27.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.4
Samples: 4

Max nTPM: 41.5
Min nTPM: 33.4
Sample A Male 33.4
Sample B Male 38.4
Sample C Female 40.3
Sample D Female 41.5
Hippocampal formation
nTPM: 36.6
Samples: 4

Max nTPM: 38.7
Min nTPM: 34.9
Sample A Male 34.9
Sample B Male 38.7
Sample C Female 35.4
Sample D Female 37.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.5
69837493 Antisense, RP_050217_02_B04, Mouse strain C57BL/6J (56 days, male) 15.5

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