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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
462.5
nTPM
Monaco:
136.6
nTPM
Schmiedel:
159.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
462.5
HPA sample
nTPM
gdT-cell nTPM: 305.5
Samples: 6
Max nTPM: 375.7
Min nTPM: 242.3
P10809_1007
242.3
P10809_1022
360.8
P10809_1041
375.7
P10809_1060
284.2
P10809_1077
283.7
P10809_1098
286.5
MAIT T-cell nTPM: 255.6
Samples: 6
Max nTPM: 307.6
Min nTPM: 142.0
P10809_1006
142.0
P10809_1024
290.2
P10809_1043
307.6
P10809_1062
272.8
P10809_1083
242.3
P10809_1097
278.7
Memory CD4 T-cell nTPM: 385.7
Samples: 6
Max nTPM: 566.3
Min nTPM: 272.4
P10809_1014
272.4
P10809_1026
566.3
P10809_1045
404.0
P10809_1064
340.0
P10809_1086
341.6
P10809_1113
389.8
Memory CD8 T-cell nTPM: 318.2
Samples: 5
Max nTPM: 405.1
Min nTPM: 224.8
P10809_1012
224.8
P10809_1027
405.1
P10809_1046
345.4
P10809_1065
329.3
P10809_1111
286.4
Naive CD4 T-cell nTPM: 388.7
Samples: 6
Max nTPM: 523.0
Min nTPM: 229.7
P10809_1015
229.7
P10809_1030
490.2
P10809_1049
523.0
P10809_1068
344.4
P10809_1085
355.0
P10809_1112
389.7
Naive CD8 T-cell nTPM: 313.1
Samples: 6
Max nTPM: 442.6
Min nTPM: 235.2
P10809_1016
235.2
P10809_1031
442.6
P10809_1050
307.1
P10809_1069
299.8
P10809_1087
308.2
P10809_1110
285.6
T-reg nTPM: 462.5
Samples: 6
Max nTPM: 651.7
Min nTPM: 297.4
P10809_1018
297.4
P10809_1037
486.5
P10809_1056
651.7
P10809_1075
422.6
P10809_1094
469.8
P10809_1106
447.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
136.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 90.3
Samples: 4
Max nTPM: 108.5
Min nTPM: 64.5
RHH5202_R3573
64.5
RHH5230_R3602
108.5
RHH5259_R3631
80.5
RHH5288_R3660
107.7
Effector memory CD8 T-cell nTPM: 81.9
Samples: 4
Max nTPM: 114.8
Min nTPM: 65.5
RHH5203_R3574
76.9
RHH5231_R3603
65.5
RHH5260_R3632
114.8
RHH5289_R3661
70.5
MAIT T-cell nTPM: 81.3
Samples: 4
Max nTPM: 94.8
Min nTPM: 71.2
RHH5233_R3605
73.7
RHH5205_R3576
71.2
RHH5262_R3634
85.4
RHH5297_R3663
94.8
Memory CD4 T-cell TFH nTPM: 122.5
Samples: 4
Max nTPM: 186.5
Min nTPM: 71.8
RHH5300_R3666
137.0
RHH5236_R3608
186.5
RHH5265_R3637
71.8
RHH5208_R3579
94.6
Memory CD4 T-cell Th1 nTPM: 121.6
Samples: 4
Max nTPM: 164.7
Min nTPM: 84.7
RHH5210_R3581
84.7
RHH5302_R3668
164.7
RHH5238_R3610
140.6
RHH5267_R3639
96.2
Memory CD4 T-cell Th1/Th17 nTPM: 100.3
Samples: 4
Max nTPM: 123.8
Min nTPM: 76.3
RHH5303_R3669
123.8
RHH5211_R3582
85.3
RHH5239_R3611
76.3
RHH5268_R3640
115.8
Memory CD4 T-cell Th17 nTPM: 98.2
Samples: 4
Max nTPM: 131.5
Min nTPM: 79.3
RHH5304_R3670
131.5
RHH5212_R3583
99.1
RHH5240_R3612
79.3
RHH5269_R3641
83.0
Memory CD4 T-cell Th2 nTPM: 94.0
Samples: 4
Max nTPM: 106.5
Min nTPM: 81.7
RHH5305_R3671
104.3
RHH5213_R3584
81.7
RHH5241_R3613
106.5
RHH5270_R3642
83.4
Naive CD4 T-cell nTPM: 136.6
Samples: 4
Max nTPM: 181.7
Min nTPM: 92.5
RHH5306_R3672
181.7
RHH5214_R3585
166.7
RHH5242_R3614
92.5
RHH5271_R3643
105.5
Naive CD8 T-cell nTPM: 84.9
Samples: 4
Max nTPM: 106.9
Min nTPM: 49.8
RHH5201_R3572
49.8
RHH5229_R3601
88.5
RHH5258_R3630
106.9
RHH5287_R3659
94.3
Non-Vd2 gdTCR nTPM: 109.1
Samples: 4
Max nTPM: 146.1
Min nTPM: 94.3
RHH5235_R3607
94.3
RHH5264_R3636
95.0
RHH5207_R3578
101.0
RHH5299_R3665
146.1
T-reg nTPM: 102.0
Samples: 4
Max nTPM: 117.3
Min nTPM: 92.3
RHH5301_R3667
117.3
RHH5237_R3609
102.0
RHH5266_R3638
92.3
RHH5209_R3580
96.4
Terminal effector memory CD4 T-cell nTPM: 96.1
Samples: 2
Max nTPM: 101.0
Min nTPM: 91.2
RHH5243_R3615
91.2
RHH5272_R3644
101.0
Terminal effector memory CD8 T-cell nTPM: 117.5
Samples: 4
Max nTPM: 191.7
Min nTPM: 80.3
RHH5232_R3604
80.3
RHH5204_R3575
191.7
RHH5261_R3633
105.2
RHH5296_R3662
92.7
Vd2 gdTCR nTPM: 133.3
Samples: 4
Max nTPM: 195.7
Min nTPM: 91.2
RHH5234_R3606
94.1
RHH5206_R3577
195.7
RHH5263_R3635
91.2
RHH5298_R3664
152.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
