HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:54.0 nTPM
HPA Brain:21.9 nTPM
GTEx:54.0 nTPM
FANTOM5:72.6 Scaled Tags Per Million
Mouse:74.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.9
Sample id Sample description nTPM
Hippocampus
nTPM: 21.8
1898 Male, age 80, left hemisphere 29.0
2529 Female, age 94, left hemisphere 23.9
1855 Male, age 76, left hemisphere 23.6
2148 Female, age 91, left hemisphere 19.9
2621 Female, age 67, right hemisphere 17.7
1911 Female, age 85, right hemisphere 16.5
Dentate gyrus
nTPM: 21.9
2010 Male, age 76, both hemispheres 32.2
2246 Female, age 85, both hemispheres 22.4
2530 Female, age 94, left hemisphere 21.3
2528 Male, age 74, both hemispheres 20.9
1927 Female, age 91, both hemispheres 18.9
2531 Female, age 67, both hemispheres 16.0
Entorhinal gyrus
nTPM: 19.5
2117 Female, age 91, right hemisphere 24.6
1938 Female, age 85, left hemisphere 21.5
1787 Male, age 76, left hemisphere 20.4
2686 Male, age 75, right hemisphere 18.4
2764 Male, age 80, right hemisphere 17.9
2613 Female, age 94, left hemisphere 14.1
Hippocampus, CA1
nTPM: 21.1
2749 Male, age 80, left hemisphere 24.4
1873 Female, age 85, both hemispheres 23.2
2045 Male, age 76, both hemispheres 22.2
2082 Female, age 91, right hemisphere 18.5
2527 Male, age 74, both hemispheres 17.4
Hippocampus, CA2
nTPM: 21.4
1963 Male, age 80, left hemisphere 25.5
1892 Male, age 76, both hemispheres 25.4
2249 Male, age 74, both hemispheres 24.2
2113 Female, age 91, right hemisphere 19.6
2437 Female, age 94, left hemisphere 18.0
1940 Female, age 85, left hemisphere 15.6
Hippocampus, CA3
nTPM: 19.5
1867 Male, age 76, both hemispheres 26.6
2436 Male, age 74, both hemispheres 20.6
1891 Female, age 85, both hemispheres 20.5
2137 Male, age 80, left hemisphere 18.5
2620 Female, age 94, left hemisphere 16.3
2861 Female, age 67, both hemispheres 14.7
Parahippocampal cortex
nTPM: 18.1
2018 Male, age 76, both hemispheres 27.2
1933 Female, age 85, both hemispheres 24.8
1850 Male, age 80, both hemispheres 20.4
1990 Female, age 91, right hemisphere 20.3
2693 Female, age 94, both hemispheres 16.7
2245 Female, age 91, both hemispheres 15.8
2250 Female, age 67, right hemisphere 15.4
2532 Female, age 72, left hemisphere 14.5
2692 Male, age 74, both hemispheres 13.3
2622 Female, age 67, right hemisphere 12.4
Perirhinal gyrus
nTPM: 18.6
1847 Female, age 91, left hemisphere 22.6
1841 Female, age 85, right hemisphere 19.7
1794 Male, age 80, right hemisphere 19.1
2521 Female, age 94, right hemisphere 16.3
2848 Male, age 76, right hemisphere 15.3
Subiculum
nTPM: 21.5
2042 Male, age 76, both hemispheres 27.3
1977 Female, age 85, both hemispheres 24.5
2438 Female, age 94, left hemisphere 21.3
2619 Male, age 74, both hemispheres 19.1
2729 Female, age 91, right hemisphere 18.5
1901 Male, age 80, both hemispheres 18.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.0
GTEx sample id Sample description nTPM
43.852.061.029.886.70102030405060708090100110120130
Brain - Hippocampus
Average nTPM: 54.0
Samples: 197

Max nTPM: 133.8
Min nTPM: 29.8
Std nTPM: 14.9
Median nTPM: 52.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 133.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 101.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 100.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 94.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 92.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 88.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 86.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 85.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 81.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 81.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 80.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.6
FF:10153-102I9 76 years, female 79.7
FF:10169-103B7 60 years, female 65.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.2
Mouse sample Sample description nTPM
68.170.774.065.578.4010203040506070
 		Entorhinal cortex
nTPM: 71.3
Samples: 4

Max nTPM: 78.4
Min nTPM: 65.5
Sample A Male 68.9
Sample B Male 78.4
Sample C Female 72.5
Sample D Female 65.5
69.573.878.466.382.901020304050607080
 		Hippocampal formation
nTPM: 74.2
Samples: 4

Max nTPM: 82.9
Min nTPM: 66.3
Sample A Male 82.9
Sample B Male 66.3
Sample C Female 70.6
Sample D Female 76.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74580978 Antisense, RP_060215_02_C07, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org