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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
657.6
nTPM
Monaco:
53.7
nTPM
Schmiedel:
147.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
657.6
HPA sample
nTPM
gdT-cell nTPM: 309.3
Samples: 6
Max nTPM: 359.3
Min nTPM: 276.6
P10809_1007
329.1
P10809_1022
276.6
P10809_1041
324.4
P10809_1060
279.8
P10809_1077
359.3
P10809_1098
286.3
MAIT T-cell nTPM: 383.3
Samples: 6
Max nTPM: 426.0
Min nTPM: 308.5
P10809_1006
308.5
P10809_1024
383.1
P10809_1043
401.6
P10809_1062
426.0
P10809_1083
387.3
P10809_1097
393.3
Memory CD4 T-cell nTPM: 544.9
Samples: 6
Max nTPM: 640.1
Min nTPM: 467.9
P10809_1014
555.6
P10809_1026
640.1
P10809_1045
494.0
P10809_1064
571.4
P10809_1086
467.9
P10809_1113
540.1
Memory CD8 T-cell nTPM: 412.3
Samples: 5
Max nTPM: 470.6
Min nTPM: 378.2
P10809_1012
381.1
P10809_1027
470.6
P10809_1046
378.2
P10809_1065
446.2
P10809_1111
385.5
Naive CD4 T-cell nTPM: 640.7
Samples: 6
Max nTPM: 736.7
Min nTPM: 511.4
P10809_1015
627.2
P10809_1030
736.7
P10809_1049
669.1
P10809_1068
706.7
P10809_1085
511.4
P10809_1112
593.1
Naive CD8 T-cell nTPM: 550.9
Samples: 6
Max nTPM: 744.8
Min nTPM: 361.7
P10809_1016
744.8
P10809_1031
643.3
P10809_1050
497.8
P10809_1069
564.2
P10809_1087
361.7
P10809_1110
493.7
T-reg nTPM: 657.6
Samples: 6
Max nTPM: 739.1
Min nTPM: 473.0
P10809_1018
473.0
P10809_1037
733.2
P10809_1056
726.6
P10809_1075
739.1
P10809_1094
680.7
P10809_1106
592.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 53.8
Samples: 4
Max nTPM: 76.8
Min nTPM: 26.8
RHH5202_R3573
26.8
RHH5230_R3602
76.8
RHH5259_R3631
61.8
RHH5288_R3660
49.6
Effector memory CD8 T-cell nTPM: 28.1
Samples: 4
Max nTPM: 37.5
Min nTPM: 20.9
RHH5203_R3574
20.9
RHH5231_R3603
22.0
RHH5260_R3632
37.5
RHH5289_R3661
31.8
MAIT T-cell nTPM: 32.1
Samples: 4
Max nTPM: 36.7
Min nTPM: 19.4
RHH5233_R3605
19.4
RHH5205_R3576
36.6
RHH5262_R3634
36.7
RHH5297_R3663
35.8
Memory CD4 T-cell TFH nTPM: 42.7
Samples: 4
Max nTPM: 73.9
Min nTPM: 29.0
RHH5300_R3666
38.3
RHH5236_R3608
73.9
RHH5265_R3637
29.6
RHH5208_R3579
29.0
Memory CD4 T-cell Th1 nTPM: 52.3
Samples: 4
Max nTPM: 90.6
Min nTPM: 18.1
RHH5210_R3581
18.1
RHH5302_R3668
38.9
RHH5238_R3610
90.6
RHH5267_R3639
61.4
Memory CD4 T-cell Th1/Th17 nTPM: 41.8
Samples: 4
Max nTPM: 57.6
Min nTPM: 23.7
RHH5303_R3669
45.1
RHH5211_R3582
23.7
RHH5239_R3611
40.9
RHH5268_R3640
57.6
Memory CD4 T-cell Th17 nTPM: 47.1
Samples: 4
Max nTPM: 57.3
Min nTPM: 34.3
RHH5304_R3670
46.2
RHH5212_R3583
34.3
RHH5240_R3612
57.3
RHH5269_R3641
50.4
Memory CD4 T-cell Th2 nTPM: 40.6
Samples: 4
Max nTPM: 59.4
Min nTPM: 27.7
RHH5305_R3671
59.4
RHH5213_R3584
32.5
RHH5241_R3613
42.8
RHH5270_R3642
27.7
Naive CD4 T-cell nTPM: 49.0
Samples: 4
Max nTPM: 67.1
Min nTPM: 35.9
RHH5306_R3672
67.1
RHH5214_R3585
47.8
RHH5242_R3614
35.9
RHH5271_R3643
45.3
Naive CD8 T-cell nTPM: 45.3
Samples: 4
Max nTPM: 76.9
Min nTPM: 14.6
RHH5201_R3572
14.6
RHH5229_R3601
76.9
RHH5258_R3630
44.2
RHH5287_R3659
45.5
Non-Vd2 gdTCR nTPM: 28.6
Samples: 4
Max nTPM: 38.4
Min nTPM: 15.3
RHH5235_R3607
34.2
RHH5264_R3636
26.5
RHH5207_R3578
15.3
RHH5299_R3665
38.4
T-reg nTPM: 46.1
Samples: 4
Max nTPM: 57.1
Min nTPM: 39.2
RHH5301_R3667
39.2
RHH5237_R3609
45.3
RHH5266_R3638
42.9
RHH5209_R3580
57.1
Terminal effector memory CD4 T-cell nTPM: 38.2
Samples: 2
Max nTPM: 40.1
Min nTPM: 36.3
RHH5243_R3615
40.1
RHH5272_R3644
36.3
Terminal effector memory CD8 T-cell nTPM: 32.9
Samples: 4
Max nTPM: 48.7
Min nTPM: 15.9
RHH5232_R3604
15.9
RHH5204_R3575
41.8
RHH5261_R3633
48.7
RHH5296_R3662
25.1
Vd2 gdTCR nTPM: 43.3
Samples: 4
Max nTPM: 77.4
Min nTPM: 25.7
RHH5234_R3606
25.7
RHH5206_R3577
77.4
RHH5263_R3635
37.1
RHH5298_R3664
32.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
