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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1172.5
nTPM
Monaco:
2262.9
nTPM
Schmiedel:
2442.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1172.5
HPA sample
nTPM
gdT-cell nTPM: 284.8
Samples: 6
Max nTPM: 575.1
Min nTPM: 89.0
P10809_1007
274.8
P10809_1022
89.0
P10809_1041
379.7
P10809_1060
230.2
P10809_1077
159.8
P10809_1098
575.1
MAIT T-cell nTPM: 78.2
Samples: 6
Max nTPM: 129.7
Min nTPM: 14.6
P10809_1006
129.7
P10809_1024
55.5
P10809_1043
106.0
P10809_1062
72.2
P10809_1083
14.6
P10809_1097
91.1
Memory CD4 T-cell nTPM: 530.1
Samples: 6
Max nTPM: 649.7
Min nTPM: 318.0
P10809_1014
614.2
P10809_1026
542.1
P10809_1045
649.7
P10809_1064
424.2
P10809_1086
318.0
P10809_1113
632.4
Memory CD8 T-cell nTPM: 294.1
Samples: 5
Max nTPM: 435.7
Min nTPM: 177.0
P10809_1012
337.6
P10809_1027
309.3
P10809_1046
210.9
P10809_1065
177.0
P10809_1111
435.7
Naive CD4 T-cell nTPM: 1172.5
Samples: 6
Max nTPM: 1434.2
Min nTPM: 888.7
P10809_1015
1072.3
P10809_1030
888.7
P10809_1049
1355.0
P10809_1068
1434.2
P10809_1085
1185.3
P10809_1112
1099.3
Naive CD8 T-cell nTPM: 685.2
Samples: 6
Max nTPM: 990.2
Min nTPM: 191.3
P10809_1016
760.0
P10809_1031
621.3
P10809_1050
785.3
P10809_1069
763.3
P10809_1087
191.3
P10809_1110
990.2
T-reg nTPM: 1013.6
Samples: 6
Max nTPM: 1210.6
Min nTPM: 787.9
P10809_1018
826.4
P10809_1037
1108.5
P10809_1056
1210.6
P10809_1075
1048.1
P10809_1094
787.9
P10809_1106
1100.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2262.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1317.4
Samples: 4
Max nTPM: 1424.1
Min nTPM: 1093.8
RHH5202_R3573
1093.8
RHH5230_R3602
1332.8
RHH5259_R3631
1419.0
RHH5288_R3660
1424.1
Effector memory CD8 T-cell nTPM: 352.3
Samples: 4
Max nTPM: 516.4
Min nTPM: 184.9
RHH5203_R3574
308.8
RHH5231_R3603
184.9
RHH5260_R3632
398.9
RHH5289_R3661
516.4
MAIT T-cell nTPM: 67.1
Samples: 4
Max nTPM: 97.0
Min nTPM: 41.0
RHH5233_R3605
70.2
RHH5205_R3576
97.0
RHH5262_R3634
60.1
RHH5297_R3663
41.0
Memory CD4 T-cell TFH nTPM: 1364.3
Samples: 4
Max nTPM: 1709.6
Min nTPM: 1027.7
RHH5300_R3666
1027.7
RHH5236_R3608
1709.6
RHH5265_R3637
1302.2
RHH5208_R3579
1417.7
Memory CD4 T-cell Th1 nTPM: 1165.0
Samples: 4
Max nTPM: 1523.0
Min nTPM: 774.6
RHH5210_R3581
1523.0
RHH5302_R3668
1095.9
RHH5238_R3610
774.6
RHH5267_R3639
1266.3
Memory CD4 T-cell Th1/Th17 nTPM: 472.6
Samples: 4
Max nTPM: 532.3
Min nTPM: 394.9
RHH5303_R3669
394.9
RHH5211_R3582
462.7
RHH5239_R3611
532.3
RHH5268_R3640
500.5
Memory CD4 T-cell Th17 nTPM: 679.7
Samples: 4
Max nTPM: 859.7
Min nTPM: 516.5
RHH5304_R3670
516.5
RHH5212_R3583
594.9
RHH5240_R3612
859.7
RHH5269_R3641
747.7
Memory CD4 T-cell Th2 nTPM: 1695.7
Samples: 4
Max nTPM: 1898.3
Min nTPM: 1532.6
RHH5305_R3671
1532.6
RHH5213_R3584
1898.3
RHH5241_R3613
1810.3
RHH5270_R3642
1541.5
Naive CD4 T-cell nTPM: 2262.9
Samples: 4
Max nTPM: 2330.2
Min nTPM: 2145.2
RHH5306_R3672
2145.2
RHH5214_R3585
2325.5
RHH5242_R3614
2250.6
RHH5271_R3643
2330.2
Naive CD8 T-cell nTPM: 2022.5
Samples: 4
Max nTPM: 2287.5
Min nTPM: 1729.4
RHH5201_R3572
2270.1
RHH5229_R3601
1803.1
RHH5258_R3630
1729.4
RHH5287_R3659
2287.5
Non-Vd2 gdTCR nTPM: 240.8
Samples: 4
Max nTPM: 307.4
Min nTPM: 179.3
RHH5235_R3607
207.4
RHH5264_R3636
268.9
RHH5207_R3578
179.3
RHH5299_R3665
307.4
T-reg nTPM: 1811.7
Samples: 4
Max nTPM: 2001.4
Min nTPM: 1434.0
RHH5301_R3667
1434.0
RHH5237_R3609
2001.4
RHH5266_R3638
1834.3
RHH5209_R3580
1977.0
Terminal effector memory CD4 T-cell nTPM: 486.3
Samples: 2
Max nTPM: 853.5
Min nTPM: 119.0
RHH5243_R3615
119.0
RHH5272_R3644
853.5
Terminal effector memory CD8 T-cell nTPM: 390.0
Samples: 4
Max nTPM: 596.4
Min nTPM: 191.0
RHH5232_R3604
269.8
RHH5204_R3575
191.0
RHH5261_R3633
596.4
RHH5296_R3662
502.6
Vd2 gdTCR nTPM: 772.1
Samples: 4
Max nTPM: 1112.8
Min nTPM: 551.1
RHH5234_R3606
742.5
RHH5206_R3577
551.1
RHH5263_R3635
1112.8
RHH5298_R3664
682.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.